RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FHITP49789 147 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 GLO1Q04760 184 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 LINC00346Q8IVM7 164 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 ERGIC1Q969X5 290 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 PIGQQ9BRB3 760 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 SEMA5BQ9P283 1151 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 UTS2O95399 124 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 MPIG6BO95866 241 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CTSBP07858 339 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 SEC11BP0C7V7 166 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 ZNF823P16415 610 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CHATP28329 748 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 OR3A2P47893 321 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 GFERP55789 205 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CLINT1Q14677 625 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 SGCBQ16585 318 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 TTLL10Q6ZVT0 673 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 REC114Q7Z4M0 266 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 ST7LQ8TDW4 575 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 PBDC1Q9BVG4 233 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 LSM5Q9Y4Y9 91 aaKnown RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 TMEM184BQ9Y519 407 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 PUS1Q9Y606 427 aaKnown RBP eCLIP7.53□□□□□ -1.2
HPS4-206ENST00000439453 MGAQ8IWI9 3026 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 SDCBPO00560 298 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 FUT7Q11130 342 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 C1orf140Q5VVS0 124 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 WDR74Q6RFH5 385 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 CLEC9AQ6UXN8 241 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 RNF144BQ7Z419 303 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 TMEM104Q8NE00 496 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 MUCL1Q96DR8 90 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 BSCL2Q96G97 398 aaPredicted RBP7.53□□□□□ -1.2
HPS4-206ENST00000439453 PRTFDC1Q9NRG1 225 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CENPMQ9NSP4 180 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 C1orf123Q9NWV4 160 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 SRPK3Q9UPE1 567 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 B3GALT5Q9Y2C3 310 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 MMP24Q9Y5R2 645 aa7.53□□□□□ -1.2
HPS4-206ENST00000439453 CXorf65A6NEN9 183 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 MASP2O00187 686 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SLC31A2O15432 143 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SYT7O43581 403 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 KNG1P01042 644 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 RNH1P13489 461 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 CRABP1P29762 137 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 RBMXP38159 391 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 CAPZBP47756 277 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SLC35A1P78382 337 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 RTP5Q14D33 572 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SSX2Q16385 188 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ZNF529Q6P280 563 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 GLIPR1L1Q6UWM5 242 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ZNF610Q8N9Z0 462 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 FNDC9Q8TBE3 224 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 EMG1Q92979 244 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 CPNE4Q96A23 557 aaPredicted RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 GALNT14Q96FL9 552 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 LIN37Q96GY3 246 aaPredicted RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 SSX3Q99909 188 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 A0A0J9YY10 115 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ARGFXA6NJG6 315 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SEC14L6B5MCN3 397 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 STMND1H3BQB6 276 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 C1QL1O75973 258 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 H2BFMP0C1H6 154 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 PTGER4P35408 488 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 TMEM50BP56557 158 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 IGLV3-21P80748 117 aaPredicted RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 PCK2Q16822 640 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ZNF674Q2M3X9 581 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 DEFB110Q30KQ9 67 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 GALNTL5Q7Z4T8 443 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 OR5D14Q8NGL3 314 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 CCDC74BQ96LY2 380 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SPACA5Q96QH8 159 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ST6GALNAC5Q9BVH7 336 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 BANF2Q9H503 90 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 PLEKHA2Q9HB19 425 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SDHAF3Q9NRP4 125 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 A8MVM7 634 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 IL33O95760 270 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 TTRP02766 147 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 NDUFB7P17568 137 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 LMO1P25800 156 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SUCLG1P53597 346 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 CSNK2A1P68400 391 aaPredicted RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 ARFRP1Q13795 201 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 LCN10Q6JVE6 187 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms