RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CAV2P51636 162 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RBM39Q14498 530 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 AKIRIN1Q9H9L7 192 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RHOFQ9HBH0 211 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 C1orf123Q9NWV4 160 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 GSKIPQ9P0R6 139 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 MUC6Q6W4X9 2439 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RIF1Q5UIP0 2472 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 IGKV1D-8A0A087WSZ0 117 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 OR5H15A6NDH6 313 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 F5H5K5 113 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 LRP3O75074 770 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 F12P00748 615 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 MUC1P15941 1255 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 PRKACAP17612 351 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RBMXP38159 391 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RSPO1Q2MKA7 263 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 PRAMEF20Q5VT98 475 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 CCDC54Q8NEL0 328 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 C10orf35Q96D05 121 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 CNTNAP3Q9BZ76 1288 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 HRH4Q9H3N8 390 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 TAF9BQ9HBM6 251 aa14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 ZNF701Q9NV72 531 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 RCC2Q9P258 522 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 MCTS1Q9ULC4 181 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-203ENST00000439316 NCOA6Q14686 2063 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 A0A087WZY1 265 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 KNG1P01042 644 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 CTSDP07339 412 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 SFTPBP07988 381 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 GUCA1AP43080 201 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 LPAR6P43657 344 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 SEMA6DQ8NFY4 1073 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 PIGTQ969N2 578 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 S100A13Q99584 98 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 DECR2Q9NUI1 292 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 MLXQ9UH92 298 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 PIGLQ9Y2B2 252 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 FAM96BQ9Y3D0 163 aa14.32□□□□□ -0.12
CLCNKA-203ENST00000439316 DHRS7CA6NNS2 312 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 TP53I11O14683 189 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 MSTNO14793 375 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 HEXAP06865 529 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 CYC1P08574 325 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 CD63P08962 238 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 SULT1A2P50226 295 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 C6orf201Q7Z4U5 140 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 TMEM123Q8N131 208 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 Q96M66 194 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 ZNF2Q9BSG1 426 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 TUBD1Q9UJT1 453 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 PCDHGA1Q9Y5H4 931 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 MED6O75586 246 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 CST4P01036 141 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 GAPDHP04406 335 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 RFC3P40938 356 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 BTNL8Q6UX41 500 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 FNDC9Q8TBE3 224 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 ZNF385AQ96PM9 386 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 ZFP57Q9NU63 452 aa14.31□□□□□ -0.12
CLCNKA-203ENST00000439316 ZNF292O60281 2723 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 CRYM-AS1A6NIL9 109 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 M0R135 149 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 DHHO43323 396 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 MTRF1O75570 445 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 DEDDO75618 318 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 SERPINA5P05154 406 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 RPL12P30050 165 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 TCF15Q12870 199 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 OR2A2Q6IF42 318 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 MRPL14Q6P1L8 145 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 SULF2Q8IWU5 870 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 SGPP2Q8IWX5 399 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 ZNF799Q96GE5 643 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 PIGQQ9BRB3 760 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 ELL3Q9HB65 397 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 DMXL1Q9Y485 3027 aa14.3□□□□□ -0.12
CLCNKA-203ENST00000439316 AHCTF1Q8WYP5 2266 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 APOC1P02654 83 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 NME2P22392 152 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 GABRR1P24046 479 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 PCOLCEQ15113 449 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 LRRC18Q8N456 261 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 HDHD3Q9BSH5 251 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 PARD6AQ9NPB6 346 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 PARP11Q9NR21 331 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 PLA2G2EQ9NZK7 142 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 CNOT1A5YKK6 2376 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 ZFHX2Q9C0A1 2572 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 RNASEK-C17orf49H0YIS7 233 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 K7EPK0 472 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 EIF1BO60739 113 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 VAMP5O95183 116 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 CD5P06127 495 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms