RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 GGNBP1Q5YKI7 109 aa13.43□□□□□ -0.26
APP-208ENST00000439274 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
APP-208ENST00000439274 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
APP-208ENST00000439274 ZNF799Q96GE5 643 aa13.43□□□□□ -0.26
APP-208ENST00000439274 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
APP-208ENST00000439274 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
APP-208ENST00000439274 IGHV5-10-1A0A0J9YXX1 117 aa13.43□□□□□ -0.26
APP-208ENST00000439274 A0A0U1RQV5 110 aa13.43□□□□□ -0.26
APP-208ENST00000439274 MEX3AA1L020 520 aaKnown RBP13.43□□□□□ -0.26
APP-208ENST00000439274 EIF1P41567 113 aaKnown RBP13.43□□□□□ -0.26
APP-208ENST00000439274 H3F3AP84243 136 aa13.43□□□□□ -0.26
APP-208ENST00000439274 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
APP-208ENST00000439274 TAF9Q16594 264 aa13.43□□□□□ -0.26
APP-208ENST00000439274 RPUSD3Q6P087 351 aaKnown RBP13.43□□□□□ -0.26
APP-208ENST00000439274 BRICD5Q6PL45 260 aa13.43□□□□□ -0.26
APP-208ENST00000439274 BTNL8Q6UX41 500 aa13.43□□□□□ -0.26
APP-208ENST00000439274 TOMM40LQ969M1 308 aa13.43□□□□□ -0.26
APP-208ENST00000439274 FSCN3Q9NQT6 498 aa13.43□□□□□ -0.26
APP-208ENST00000439274 DMDP11532 3685 aa13.42□□□□□ -0.26
APP-208ENST00000439274 LOC102725191A0A1B0GVB3 256 aa13.42□□□□□ -0.26
APP-208ENST00000439274 ZNF98A6NK75 572 aa13.42□□□□□ -0.26
APP-208ENST00000439274 MTRF1O75570 445 aaKnown RBP13.42□□□□□ -0.26
APP-208ENST00000439274 FCGR3AP08637 254 aa13.42□□□□□ -0.26
APP-208ENST00000439274 OR8U9P0C7N5 309 aa13.42□□□□□ -0.26
APP-208ENST00000439274 GLI4P10075 376 aa13.42□□□□□ -0.26
APP-208ENST00000439274 ACKR3P25106 362 aa13.42□□□□□ -0.26
APP-208ENST00000439274 AKR1C3P42330 323 aa13.42□□□□□ -0.26
APP-208ENST00000439274 KCNJ3P48549 501 aa13.42□□□□□ -0.26
APP-208ENST00000439274 SULT1A2P50226 295 aa13.42□□□□□ -0.26
APP-208ENST00000439274 TMEM33P57088 247 aa13.42□□□□□ -0.26
APP-208ENST00000439274 STARD6P59095 220 aa13.42□□□□□ -0.26
APP-208ENST00000439274 RAET1LQ5VY80 246 aa13.42□□□□□ -0.26
APP-208ENST00000439274 Q6ZRG5 221 aa13.42□□□□□ -0.26
APP-208ENST00000439274 SGPP2Q8IWX5 399 aa13.42□□□□□ -0.26
APP-208ENST00000439274 OR8U1Q8NH10 309 aa13.42□□□□□ -0.26
APP-208ENST00000439274 PP6455Q8WZ26 134 aa13.42□□□□□ -0.26
APP-208ENST00000439274 DNASE2BQ8WZ79 361 aa13.42□□□□□ -0.26
APP-208ENST00000439274 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
APP-208ENST00000439274 ERGIC1Q969X5 290 aa13.42□□□□□ -0.26
APP-208ENST00000439274 FBXO17Q96EF6 278 aa13.42□□□□□ -0.26
APP-208ENST00000439274 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
APP-208ENST00000439274 AMDHD2Q9Y303 409 aa13.42□□□□□ -0.26
APP-208ENST00000439274 FAM230AA0A1W2PPH8 454 aa13.42□□□□□ -0.26
APP-208ENST00000439274 TAAR5O14804 337 aa13.42□□□□□ -0.26
APP-208ENST00000439274 DEDDO75618 318 aa13.42□□□□□ -0.26
APP-208ENST00000439274 CST4P01036 141 aa13.42□□□□□ -0.26
APP-208ENST00000439274 MTCP1P56278 107 aa13.42□□□□□ -0.26
APP-208ENST00000439274 C10orf128Q5T292 105 aa13.42□□□□□ -0.26
APP-208ENST00000439274 TSPO2Q5TGU0 170 aa13.42□□□□□ -0.26
APP-208ENST00000439274 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
APP-208ENST00000439274 CCDC74BQ96LY2 380 aa13.42□□□□□ -0.26
APP-208ENST00000439274 Q96M66 194 aa13.42□□□□□ -0.26
APP-208ENST00000439274 ANXA10Q9UJ72 324 aa13.42□□□□□ -0.26
APP-208ENST00000439274 PADI1Q9ULC6 663 aa13.42□□□□□ -0.26
APP-208ENST00000439274 CRYM-AS1A6NIL9 109 aa13.41□□□□□ -0.26
APP-208ENST00000439274 NPIPA2E9PIF3 369 aa13.41□□□□□ -0.26
APP-208ENST00000439274 NPIPA3F8WFD2 350 aa13.41□□□□□ -0.26
APP-208ENST00000439274 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
APP-208ENST00000439274 DHHO43323 396 aa13.41□□□□□ -0.26
APP-208ENST00000439274 OR5H8P0DN80 308 aa13.41□□□□□ -0.26
APP-208ENST00000439274 ADH6P28332 368 aa13.41□□□□□ -0.26
APP-208ENST00000439274 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
APP-208ENST00000439274 NSUN5P2Q63ZY6 315 aa13.41□□□□□ -0.26
APP-208ENST00000439274 EIF5AL1Q6IS14 154 aaKnown RBP13.41□□□□□ -0.26
APP-208ENST00000439274 DHRS11Q6UWP2 260 aa13.41□□□□□ -0.26
APP-208ENST00000439274 PRRX2Q99811 253 aa13.41□□□□□ -0.26
APP-208ENST00000439274 SULT4A1Q9BR01 284 aa13.41□□□□□ -0.26
APP-208ENST00000439274 OCIAD1Q9NX40 245 aa13.41□□□□□ -0.26
APP-208ENST00000439274 AK3Q9UIJ7 227 aa13.41□□□□□ -0.26
APP-208ENST00000439274 FAM221AA4D161 298 aa13.41□□□□□ -0.26
APP-208ENST00000439274 MASP2O00187 686 aa13.41□□□□□ -0.26
APP-208ENST00000439274 CD5P06127 495 aa13.41□□□□□ -0.26
APP-208ENST00000439274 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
APP-208ENST00000439274 CCL3P10147 92 aa13.41□□□□□ -0.26
APP-208ENST00000439274 HOXA1P49639 335 aaPredicted RBP13.41□□□□□ -0.26
APP-208ENST00000439274 EIF5AP63241 154 aaKnown RBP13.41□□□□□ -0.26
APP-208ENST00000439274 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
APP-208ENST00000439274 OR9K2Q8NGE7 335 aa13.41□□□□□ -0.26
APP-208ENST00000439274 GLYATL2Q8WU03 294 aa13.41□□□□□ -0.26
APP-208ENST00000439274 AKR1E2Q96JD6 320 aa13.41□□□□□ -0.26
APP-208ENST00000439274 IGKV1-27A0A075B6S5 117 aa13.4□□□□□ -0.26
APP-208ENST00000439274 LY6G6EA0A0G2JKS1 128 aa13.4□□□□□ -0.26
APP-208ENST00000439274 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
APP-208ENST00000439274 PIGPP57054 158 aa13.4□□□□□ -0.26
APP-208ENST00000439274 HGFACQ04756 655 aa13.4□□□□□ -0.26
APP-208ENST00000439274 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
APP-208ENST00000439274 MARS2Q96GW9 593 aaKnown RBP13.4□□□□□ -0.26
APP-208ENST00000439274 C12orf57Q99622 126 aa13.4□□□□□ -0.26
APP-208ENST00000439274 C19orf25Q9UFG5 118 aaPredicted RBP13.4□□□□□ -0.26
APP-208ENST00000439274 TUBD1Q9UJT1 453 aa13.4□□□□□ -0.26
APP-208ENST00000439274 U3KQA8 63 aa13.4□□□□□ -0.26
APP-208ENST00000439274 CACNA1EQ15878 2313 aa13.4□□□□□ -0.26
APP-208ENST00000439274 ZNF850A8MQ14 1090 aa13.4□□□□□ -0.26
APP-208ENST00000439274 FAM157AC9JC47 383 aa13.4□□□□□ -0.26
APP-208ENST00000439274 TP53I11O14683 189 aa13.4□□□□□ -0.26
APP-208ENST00000439274 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
APP-208ENST00000439274 F2RL1P55085 397 aa13.4□□□□□ -0.26
APP-208ENST00000439274 FXYD4P59646 89 aa13.4□□□□□ -0.26
APP-208ENST00000439274 HIST1H3AP68431 136 aa13.4□□□□□ -0.26
APP-208ENST00000439274 PCOLCEQ15113 449 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms