RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SLC18B1Q6NT16 456 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TEX38Q6PEX7 206 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 C19orf35Q6ZS72 473 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TMPRSS7Q7RTY8 843 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 C1orf87Q8N0U7 546 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SUMF1Q8NBK3 374 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 OR4C5Q8NGB2 326 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 KTI12Q96EK9 354 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 CABLES2Q9BTV7 478 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 Q9N2J8 555 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 LRP12Q9Y561 859 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 A0A0U1RQK1 487 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 IGLON5A6NGN9 336 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SYT7O43581 403 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SLC2A1P11166 492 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ERGP11308 486 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PNLIPP16233 465 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PTGER4P35408 488 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 HERV-K104P61576 105 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 EGR3Q06889 387 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 FAM69BQ5VUD6 431 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 OR5R1Q8NH85 324 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SCGB1C1Q8TD33 95 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 TVP23CQ96ET8 276 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 LINC00615Q96LM1 132 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 TLCD2A6NGC4 264 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 C17orf51A8MQB3 221 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 HSD17B6O14756 317 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 HERPUD1Q15011 391 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 LYPD6BQ8NI32 183 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 B3GALT1Q9Y5Z6 326 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 XKRY2A2RUG3 117 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 A6NIZ1 184 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 FTCDNL1E5RQL4 147 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 CA11O75493 328 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 DFFBO76075 338 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 NUDT3O95989 172 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 GNRHRP30968 328 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 MMP16P51512 607 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 RAP1BP61224 184 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 GPR157Q5UAW9 335 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 CBLN3Q6UW01 205 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 KLHDC7BQ96G42 594 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 FAAP24Q9BTP7 215 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 NKX2-4Q9H2Z4 354 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 DAPP1Q9UN19 280 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 IGKV1D-42A0A075B6H8 117 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 CCDC187A0A096LP49 1063 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 GAPDHP04406 335 aaKnown RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 FCER1GP30273 86 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 DUSP3P51452 185 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 TDGF1P3P51864 188 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PLP2Q04941 152 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 OR5I1Q13606 314 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ARHGAP5-AS1Q96IT6 56 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 FOXQ1Q9C009 403 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 HCFC2Q9Y5Z7 792 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ANAPC1Q9H1A4 1944 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF850A8MQ14 1090 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 LDLRAD4O15165 306 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SEC11BP0C7V7 166 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SLC25A1P53007 311 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 OR4X1Q8NH49 305 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 DIRC2Q96SL1 478 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 AK3Q9UIJ7 227 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PITPNC1Q9UKF7 332 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SCN10AQ9Y5Y9 1956 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF264O43296 627 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 LYL1P12980 280 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PEBP1P30086 187 aaKnown RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 GLIPR1P48060 266 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 PSG6Q00889 435 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF74Q16587 644 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM176BQ3YBM2 270 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-202ENST00000435070 RAET1LQ5VY80 246 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF66Q6ZN08 573 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 B3GALT5Q9Y2C3 310 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 RHBDD3Q9Y3P4 386 aa6.6□□□□□ -1.35
CPSF6-202ENST00000435070 MYO7BQ6PIF6 2116 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ARHGAP21Q5T5U3 1957 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF217O75362 1048 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 NXPH3O95157 252 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 PVRP15151 417 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 BCKDHBP21953 392 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 MAS1LP35410 378 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 HNRNPKP61978 463 aaKnown RBP eCLIP6.59□□□□□ -1.352e-13■■■□□ 17.6
CPSF6-202ENST00000435070 COL10A1Q03692 680 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 PCK2Q16822 640 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 PLAC9Q5JTB6 97 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 KCTD18Q6PI47 426 aaPredicted RBP6.59□□□□□ -1.35
CPSF6-202ENST00000435070 GLIPR1L1Q6UWM5 242 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 BEND2Q8NDZ0 799 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 LRFN1Q9P244 771 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 LAMP3Q9UQV4 416 aa6.59□□□□□ -1.35
CPSF6-202ENST00000435070 ZFP92A6NM28 416 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms