RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.15□□□□□ -1.9
PTP4A1P3-201ENST00000433661 NSD1Q96L73 2696 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 MAP1AP78559 2803 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 TMEM120BA0PK00 339 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 OR6C74A6NCV1 312 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF99A8MXY4 864 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RSPH10B2B2RC85 870 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 BPY2O14599 106 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 XRCC2O43543 280 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 NEMFO60524 1076 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SEMA3DO95025 777 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RSPH10BP0C881 870 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PRKACAP17612 351 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 USF1P22415 310 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PFN2P35080 140 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 HCAR3P49019 387 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PFN3P60673 137 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 DNAJC3Q13217 504 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 HTR4Q13639 388 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 NKAIN1Q4KMZ8 207 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PLET1Q6UQ28 207 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZFP2Q6ZN57 461 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 Q6ZR03 302 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 WDR86Q86TI4 376 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PRSS58Q8IYP2 241 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZFP41Q8N8Y5 198 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 LRRC75AQ8NAA5 344 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 DRAXINQ8NBI3 349 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 UBALD1Q8TB05 177 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ITFG1Q8TB96 612 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RGP1Q92546 391 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CSPG4P5Q96PW8 444 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 FOXC2Q99958 501 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PIGUQ9H490 435 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 C8orf33Q9H7E9 229 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 MRM3Q9HC36 420 aaKnown RBP3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 MED4Q9NPJ6 270 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CTSFQ9UBX1 484 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PSG11Q9UQ72 335 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RAD50Q92878 1312 aa3.15□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF469Q96JG9 3925 aaPredicted RBP3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 LAMA4Q16363 1823 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ARPC4-TTLL3A0A0A6YYG9 625 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ANKRD63C9JTQ0 380 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 H7C417 338 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 M0QX08 132 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 BET1O15155 118 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF207O43670 478 aaKnown RBP3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 WISP3O95389 354 aaPredicted RBP3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PGAM1P18669 254 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SSTR5P35346 364 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RFC3P40938 356 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RPS15AP62244 130 aaKnown RBP3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RAP1AP62834 184 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 EBI3Q14213 229 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SYCP1Q15431 976 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CAVIN4Q5BKX8 364 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 TFDP3Q5H9I0 405 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 DNAJC24Q6P3W2 148 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 FAM71AQ8IYT1 594 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PGAM4Q8N0Y7 254 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 METTL13Q8N6R0 699 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 COX18Q8N8Q8 333 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 INO80EQ8NBZ0 244 aaPredicted RBP3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 OR10G2Q8NGC3 310 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 OR10W1Q8NGF6 305 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 OR5W2Q8NH69 310 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 PIFOQ8TCI5 191 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RNF145Q96MT1 663 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SAMD10Q9BYL1 202 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 BLZF1Q9H2G9 400 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 C12orf10Q9HB07 376 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 AGPAT4Q9NRZ5 378 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 MTFP1Q9UDX5 166 aa3.14□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RYR3Q15413 4870 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 IGHV1OR15-9A0A0B4J2B8 117 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 A0A0J9YXV3 536 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 A0A1W2PNU3 283 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 GABRR3A8MPY1 467 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF324O75467 553 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 MED6O75586 246 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 POLR2MP0CAP2 368 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SRMP19623 302 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CSNK2A2P19784 350 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 DOC2AQ14183 400 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 IGFBP7Q16270 282 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 HIKESHIQ53FT3 197 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 ZNF691Q5VV52 312 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 AP1ARQ63HQ0 302 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 RWDD4Q6NW29 188 aaKnown RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 HORMAD1Q86X24 394 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CDKL3Q8IVW4 592 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CMTM8Q8IZV2 173 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CBR4Q8N4T8 237 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 CYB561D1Q8N8Q1 229 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 OR10G6Q8NH81 332 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 SUN5Q8TC36 379 aa3.13□□□□□ -1.91
PTP4A1P3-201ENST00000433661 NARS2Q96I59 477 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms