RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 DPP4P27487 766 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 FMODQ06828 376 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 MRPL2Q5T653 305 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 PWWP2BQ6NUJ5 590 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 OR4N5Q8IXE1 308 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 NOX4Q9NPH5 578 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 PITX3O75364 302 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 HOXD9P28356 352 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 MAS1LP35410 378 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 AKR1C1Q04828 323 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 MZT1Q08AG7 82 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 DMBX1Q8NFW5 382 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 SLC6A13Q9NSD5 602 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 IL17BQ9UHF5 180 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 B4DGG1 531 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 IGLV3-25P01717 112 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 NTSR1P30989 418 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 TMEM249Q2WGJ8 235 aa6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 MSI2Q96DH6 328 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 NAA11Q9BSU3 229 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 LIN7CQ9NUP9 197 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 TBL2Q9Y4P3 447 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-202ENST00000429713 CUL9Q8IWT3 2517 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ANKHD1Q8IWZ3 2542 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 KIAA1324LA8MWY0 1029 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 APOBEC3AP31941 199 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PTGER1P34995 402 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PSMB10P40306 273 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 RPS4Y2Q8TD47 263 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 SPTSSAQ969W0 71 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 TSPAN32Q96QS1 320 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 OR8B4Q96RC9 309 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ALG12Q9BV10 488 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 P2RY12Q9H244 342 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PDFQ9HBH1 243 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 KLRF1Q9NZS2 232 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 APOBEC3BQ9UH17 382 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 GPR34Q9UPC5 381 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 NEU3Q9UQ49 428 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 UMODP07911 640 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CRISP2P16562 243 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 NKX2-1P43699 371 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 HOXC5Q00444 222 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 BEX5Q5H9J7 111 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 OR51Q1Q8NH59 317 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PGAM5Q96HS1 289 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 REG4Q9BYZ8 158 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 NKX2-4Q9H2Z4 354 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 HRASLS2Q9NWW9 162 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 INSL6Q9Y581 213 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 A8MWP6 167 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 DIRC3C9JPN6 131 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 C1QAP02745 245 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 EFNB1P98172 346 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 NUFIP2Q7Z417 695 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 OR52L2PQ8NGH6 319 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 GPR174Q9BXC1 333 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CUTCQ9NTM9 273 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 MALRD1Q5VYJ5 2156 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 HIDE1A8MVS5 230 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 UBE2V1Q13404 147 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CLEC1AQ8NC01 280 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PRTFDC1Q9NRG1 225 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 C7orf71A4D174 169 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ZNF136P52737 540 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 MRGPREQ86SM8 312 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ARIH2OSQ8N7S6 290 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 OR4S1Q8NGB4 309 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PCNPQ8WW12 178 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 SDHCQ99643 169 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 RHNO1Q9BSD3 238 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 IER3IP1Q9Y5U9 82 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 TRAV30A0A087WSZ9 112 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ALG1L2C9J202 215 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 F8VVB4 439 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 F8VWA3 439 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CD79AP11912 226 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 HIST1H1TP22492 207 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 SHC1P29353 583 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 ROBO4Q8WZ75 1007 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 DCBLD2Q96PD2 775 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CXorf36Q9H7Y0 433 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 MRPS17Q9Y2R5 130 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 B4E171 279 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 CATR1Q13166 79 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 PRDM7Q9NQW5 492 aa6.77□□□□□ -1.33
SYNPO2-202ENST00000429713 A0A1W2PP55 124 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 ACAA2P42765 397 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 SELENOPP49908 381 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 BTG2P78543 158 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 TLE1Q04724 770 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 FZD5Q13467 585 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 ZNF48Q96MX3 618 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 OR2J1Q9GZK6 312 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 SEMA6CQ9H3T2 930 aa6.76□□□□□ -1.33
SYNPO2-202ENST00000429713 A0A1B0GTL3 188 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms