RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF260Q3ZCT1 412 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 EIF5AL1Q6IS14 154 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 CLEC18BQ6UXF7 455 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 HSD17B13Q7Z5P4 300 aaPredicted RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 FAM71E2Q8N5Q1 922 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 MFSD8Q8NHS3 518 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 PIGCQ92535 297 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 SLAMF9Q96A28 289 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 REG4Q9BYZ8 158 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 DNTTIP1Q9H147 329 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 PIGMQ9H3S5 423 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 OR5AC2Q9NZP5 309 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 LAMA5O15230 3695 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 IGHV3-64DA0A0J9YX35 117 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TUBAL3A6NHL2 446 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 MSGN1A6NI15 193 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 OR6C76A6NM76 312 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TP53I11O14683 189 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 OR7C1O76099 320 aaPredicted RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 SNAPINO95295 136 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TSPAN15O95858 294 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 HPP00738 406 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 CRHP06850 196 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 HIST1H1DP16402 221 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 OTX2P32243 289 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 RFC3P40938 356 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ROM1Q03395 351 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 PDZK1IP1Q13113 114 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 KISS1Q15726 138 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 MPPED2Q15777 294 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TMEM128Q5BJH2 165 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TEX30Q5JUR7 227 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 SAPCD1Q5SSQ6 148 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 THEM4Q5T1C6 240 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 RPL7L1Q6DKI1 246 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 YRDCQ86U90 279 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 SLC25A42Q86VD7 318 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 PPP1R3BQ86XI6 285 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 WDFY1Q8IWB7 410 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 CLRN3Q8NCR9 226 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 OR14L1PQ8NHC6 308 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 REEP6Q96HR9 211 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TAF9BQ9HBM6 251 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ALKBH4Q9NXW9 302 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 B3GALT5Q9Y2C3 310 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 POMT1Q9Y6A1 747 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ANKUB1A6NFN9 424 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ABCD4O14678 606 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 CDC14BO60729 498 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 SNAPC5O75971 98 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 MBP02144 154 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 FGF2P09038 288 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 JMJD7P0C870 316 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ZBTB25P24278 435 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ADH6P28332 368 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 CLINT1Q14677 625 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 DPPA2Q7Z7J5 298 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 RNF133Q8WVZ7 376 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ST8SIA1Q92185 356 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 MVB12AQ96EY5 273 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 ALKBH3Q96Q83 286 aaPredicted RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 CMSS1Q9BQ75 279 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 SULT4A1Q9BR01 284 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 LDAHQ9H6V9 325 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 PARD6AQ9NPB6 346 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 SLC17A5Q9NRA2 495 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 KCNIP3Q9Y2W7 256 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 THADAQ6YHU6 1953 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 LIPT2A6NK58 231 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 WRBO00258 174 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 EFSO43281 561 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 PET100P0DJ07 73 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 GLB1P16278 677 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 HERV-K104P61576 105 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 C6orf15Q6UXA7 325 aaPredicted RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 P4HA3Q7Z4N8 544 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 ANKRD37Q7Z713 158 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 PUSL1Q8N0Z8 303 aaKnown RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 ZNF596Q8TC21 504 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 MITD1Q8WV92 249 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 BORCS8Q96FH0 119 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 FAAP24Q9BTP7 215 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 C19orf25Q9UFG5 118 aaPredicted RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 FLVCR1Q9Y5Y0 555 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 RNF222A6NCQ9 220 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 HSPB2A8KAH6 182 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 GATCO43716 136 aaKnown RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 DUS4LO95620 317 aaKnown RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 GP1BAP07359 652 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 CHRM2P08172 466 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 ZNF84P51523 738 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SRSF3P84103 164 aaKnown RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 CFHR1Q03591 330 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 HSPB2Q16082 182 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 DRAM2Q6UX65 266 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 Q6ZRG5 221 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms