RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PRRG3Q9BZD7 231 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 PPA2Q9H2U2 334 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 KRT84Q9NSB2 600 aa13.95□□□□□ -0.18
TRIM39-209ENST00000428728 RFPL4AA6NLU0 287 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 RFPL4AL1F8VTS6 287 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 H3BUX3 64 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 J3QT63 122 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-209ENST00000428728 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-209ENST00000428728 PAX6P26367 422 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 HAAOP46952 286 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 OCLNQ16625 522 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 MEPCEQ7L2J0 689 aaKnown RBP13.94□□□□□ -0.18
TRIM39-209ENST00000428728 KRT74Q7RTS7 529 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 CD177Q8N6Q3 437 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 TCEANCQ8N8B7 351 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 OR5D13Q8NGL4 314 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 OR5K1Q8NHB7 308 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 RORBQ92753 470 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 SDSLQ96GA7 329 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 C16orf95Q9H693 158 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 MOB1AQ9H8S9 216 aa13.94□□□□□ -0.18
TRIM39-209ENST00000428728 SF3B6Q9Y3B4 125 aaKnown RBP13.94□□□□□ -0.18
TRIM39-209ENST00000428728 A6NIN4 97 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 SRSF10O75494 262 aaKnown RBP13.93□□□□□ -0.18
TRIM39-209ENST00000428728 MTRF1O75570 445 aaKnown RBP13.93□□□□□ -0.18
TRIM39-209ENST00000428728 NXPH2O95156 264 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 EPHA2P29317 976 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 TGFBR2P37173 567 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 LY6EQ16553 131 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 CLVS2Q5SYC1 327 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 ASRGL1Q7L266 308 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 MKXQ8IYA7 352 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 BEND2Q8NDZ0 799 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 OR4M1Q8NGD0 313 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 OR51G2Q8NGK0 314 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 UTP4Q969X6 686 aaKnown RBP13.93□□□□□ -0.18
TRIM39-209ENST00000428728 SSX3Q99909 188 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 ADGRL4Q9HBW9 690 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 RASL12Q9NYN1 266 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 H2AFY2Q9P0M6 372 aaPredicted RBP13.93□□□□□ -0.18
TRIM39-209ENST00000428728 OR14J1Q9UGF5 321 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 OR52A1Q9UKL2 312 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 R4GMQ9 66 aa13.93□□□□□ -0.18
TRIM39-209ENST00000428728 SLC22A31A6NKX4 558 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF670-ZNF695F2Z2N8 137 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 H3BSH0 61 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 SLC1A7O00341 560 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 TSPAN9O75954 239 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
TRIM39-209ENST00000428728 SLX4IPQ5VYV7 408 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF573Q86YE8 665 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 TRMT10AQ8TBZ6 339 aaKnown RBP13.92□□□□□ -0.18
TRIM39-209ENST00000428728 TMEM163Q8TC26 289 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 IL4I1Q96RQ9 567 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 TBX5Q99593 518 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 POLDIP2Q9Y2S7 368 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 V9GYS6 101 aa13.92□□□□□ -0.18
TRIM39-209ENST00000428728 PQLC2LA1A4F0 135 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 RPP14O95059 124 aaKnown RBP13.91□□□□□ -0.18
TRIM39-209ENST00000428728 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
TRIM39-209ENST00000428728 CCL3L1P16619 93 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 COX7A1P24310 79 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 GABRA5P31644 462 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 PRDX2P32119 198 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 BMXP51813 675 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 ACTR3P61158 418 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 ODF4Q2M2E3 257 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 AADACL4Q5VUY2 407 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 C12orf73Q69YU5 71 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 SLC35E4Q6ICL7 350 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 SSX6Q7RTT6 188 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 ELMOD2Q8IZ81 293 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 OR14K1Q8NGZ2 314 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 CADM1Q9BY67 442 aaKnown RBP13.91□□□□□ -0.18
TRIM39-209ENST00000428728 CLN6Q9NWW5 311 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 MRM2Q9UI43 246 aaKnown RBP13.91□□□□□ -0.18
TRIM39-209ENST00000428728 SLC22A13Q9Y226 551 aa13.91□□□□□ -0.18
TRIM39-209ENST00000428728 A0A1B0GTI1 187 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 A0A1W2PPH5 198 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 G3V2T6 193 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 DLGAP1O14490 977 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 APOL3O95236 402 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF273Q14593 569 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 ATP6AP1Q15904 470 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 C2orf68Q2NKX9 166 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 TMEM42Q69YG0 159 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
TRIM39-209ENST00000428728 GID4Q8IVV7 300 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 YIPF7Q8N8F6 280 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 OR2T27Q8NH04 317 aa13.9□□□□□ -0.18
TRIM39-209ENST00000428728 FAM110DQ8TAY7 271 aaPredicted RBP13.9□□□□□ -0.18
TRIM39-209ENST00000428728 MNTQ99583 582 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms