RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 R4GMQ9 66 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TLX1P31314 330 aaPredicted RBP4.52□□□□□ -1.69
RIF1-203ENST00000428287 TAS2R46P59540 309 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ZNF266Q14584 549 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 LHX8Q68G74 356 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 OR2T2Q6IF00 324 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SLC18B1Q6NT16 456 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CA5BP1Q8WTZ4 195 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 KCNK15Q9H427 330 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 G6PC2Q9NQR9 355 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SLC17A4Q9Y2C5 497 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SMCO3A2RU48 225 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CLEC18AA5D8T8 446 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 MT-ATP6P00846 226 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 HBE1P02100 147 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 PGA3P0DJD8 388 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 LIPCP11150 499 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 FUT7Q11130 342 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 HERPUD1Q15011 391 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ELOA3BQ3SY89 546 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 WBP2NLQ6ICG8 309 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 CLEC18CQ8NCF0 446 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ELOA3Q8NG57 546 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 RNF133Q8WVZ7 376 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 COL26A1Q96A83 441 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 SNX22Q96L94 193 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 TM2D1Q9BX74 207 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ASCL3Q9NQ33 180 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 DHDHQ9UQ10 334 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 ZFP30Q9Y2G7 519 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 LRP12Q9Y561 859 aa4.52□□□□□ -1.69
RIF1-203ENST00000428287 A0A1W2PN81 502 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 PRSS37A4D1T9 235 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 IGKV1D-16P01601 117 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MBP02144 154 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CTSSP25774 331 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 OTX1P32242 354 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 GABRA3P34903 492 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CHRNA7P36544 502 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MTCP1P56278 107 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CHRFAM7AQ494W8 412 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 SAPCD1Q5SSQ6 148 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF343Q6P1L6 599 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 OR13C3Q8NGS6 347 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 NUS1Q96E22 293 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 BSCL2Q96G97 398 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 P2RX4Q99571 388 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 TXNIPQ9H3M7 391 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 NCOR1P1Q9H4R4 102 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 HRNRQ86YZ3 2850 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 BORCS7-ASMTA0A0B4J1R7 106 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 FGF17O60258 216 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CSTAP01040 98 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 DTYMKP23919 212 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 RPS27P42677 84 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 CSNK1A1P48729 337 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ICAM4Q14773 271 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 GXYLT1Q4G148 440 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF506Q5JVG8 444 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CRIP3Q6Q6R5 217 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 OR5D14Q8NGL3 314 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CABLES2Q9BTV7 478 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ATXN7L1Q9ULK2 861 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 A0A0A6YYD4 124 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 YPEL1O60688 119 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 IGHMP01871 453 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MBPP02686 304 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 PCCBP05166 539 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 SLC35G6P0C7Q6 338 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ESDP10768 282 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 AKR1C4P17516 323 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CCL1P22362 96 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 UCP3P55916 312 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF616Q08AN1 781 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 KIR2DS3Q14952 304 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 DEFB134Q4QY38 66 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 THEM4Q5T1C6 240 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 FJX1Q86VR8 437 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 H1FOOQ8IZA3 346 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 CMBLQ96DG6 245 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MRGPRX4Q96LA9 322 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 YPEL2Q96QA6 119 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 TCEAL2Q9H3H9 227 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.51□□□□□ -1.69
RIF1-203ENST00000428287 MYOTQ9UBF9 498 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 WASF3Q9UPY6 502 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MUC6Q6W4X9 2439 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 GRXCR1A8MXD5 290 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 PPP5D1E7EU14 171 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 H0YL77 283 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 GEMIN2O14893 280 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 BGLAPP02818 100 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 FGF5P12034 268 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 EMP2P54851 167 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ITPRIPL2Q3MIP1 535 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 RTL10Q7L3V2 364 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms