RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DGAT2L6Q6ZPD8 337 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 HSD17B13Q7Z5P4 300 aaPredicted RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 OR1B1Q8NGR6 318 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SFT2D1Q8WV19 159 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 DEDD2Q8WXF8 326 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GNPNAT1Q96EK6 184 aaPredicted RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 ASCL3Q9NQ33 180 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 TREX1Q9NSU2 369 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ST3GAL6Q9Y274 331 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 INSIG2Q9Y5U4 225 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 PRSS37A4D1T9 235 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ZNF98A6NK75 572 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 KRASP01116 189 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GASTP01350 101 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 RNF224P0DH78 156 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 RRASP10301 218 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SRMP19623 302 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 NXPH1P58417 271 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 PRSS53Q2L4Q9 553 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 AGBL4Q5VU57 503 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ZNF691Q5VV52 312 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 DHRS4L2Q6PKH6 230 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 RFLNAQ6ZTI6 216 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 OR10D3Q8NH80 312 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 ALKBH3Q96Q83 286 aaPredicted RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 RNF2Q99496 336 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 MIEN1Q9BRT3 115 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GMPR2Q9P2T1 348 aaKnown RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 CGGBP1Q9UFW8 167 aaPredicted RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 AK3Q9UIJ7 227 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ANXA10Q9UJ72 324 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 M0QYG6 137 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ARNTLO00327 626 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 FCGR3BO75015 233 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GPX5O75715 221 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 MTNR1BP49286 362 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 YBX1P67809 324 aaKnown RBP5.13□□□□□ -1.59
HERC4-206ENST00000427635 PAX5Q02548 391 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 FUT7Q11130 342 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 OR2T2Q6IF00 324 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 ARIH2OSQ8N7S6 290 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 C16orf52Q8NHV5 167 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 CCL4L1Q8NHW4 92 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GHSRQ92847 366 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 DERL3Q96Q80 235 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 CXorf36Q9H7Y0 433 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 FAM53CQ9NYF3 392 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 OR1A1Q9P1Q5 309 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 OSGIN1Q9UJX0 560 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 A4GNTQ9UNA3 340 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 J3QR89 54 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SYNGR2O43760 224 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 CD1EP15812 388 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SLC16A12Q6ZSM3 486 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SGMS2Q8NHU3 365 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GPR119Q8TDV5 335 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 GPX8Q8TED1 209 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 SRRQ9GZT4 340 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 TREM2Q9NZC2 230 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 NTMQ9P121 344 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 PIK3C2AO00443 1686 aa5.13□□□□□ -1.59
HERC4-206ENST00000427635 CLEC18AA5D8T8 446 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 PMS2P2O95744 297 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SULT1A3P0DMM9 295 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SULT1A4P0DMN0 295 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SNRPBP14678 240 aaKnown RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 UBE2MP61081 183 aaKnown RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 CDC20Q12834 499 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 TOMM34Q15785 309 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 LYPD4Q6UWN0 246 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ZNF511Q8NB15 262 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 CLEC18CQ8NCF0 446 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 UBALD1Q8TB05 177 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 GATA6Q92908 595 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 Q96M85 177 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 METTL26Q96S19 204 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 FAM103A1Q9BTL3 118 aaKnown RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SLA2Q9H6Q3 261 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ACER3Q9NUN7 267 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 NUP188Q5SRE5 1749 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 PSMB2P49721 201 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 FOXA1P55317 472 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 LSM11P83369 360 aaKnown RBP eCLIP5.12□□□□□ -1.59
HERC4-206ENST00000427635 RELAQ04206 551 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 DUSP8Q13202 625 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ACOT7LQ6ZUV0 252 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SIGLECL1Q8N7X8 197 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 FAM181AQ8N9Y4 354 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 NOL4LQ96MY1 436 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 WDFY2Q96P53 400 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 NPAS1Q99742 590 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SLC25A22Q9H936 323 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SDR39U1Q9NRG7 319 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 TRIOBPQ9H2D6 2365 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ANKRD36CQ5JPF3 1778 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 MARCH11A6NNE9 402 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 DEFB108AA8MXU0 73 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms