RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 GMFBP60983 142 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 SORDQ00796 357 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TAF9Q16594 264 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 ASCL4Q6XD76 172 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 EMG1Q92979 244 aaKnown RBP12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TECTBQ96PL2 329 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 PHB2Q99623 299 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 EHFQ9NZC4 300 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF850A8MQ14 1090 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 SDCBPO00560 298 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 CFDP00746 253 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 AGTR1P30556 359 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 RAB1AP62820 205 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 PDZK1IP1Q13113 114 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR56B2PQ8NGI1 322 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 MITD1Q8WV92 249 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 PDCD10Q9BUL8 212 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 UBQLN2Q9UHD9 624 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
APOBEC3D-202ENST00000427494 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 FPR2P25090 351 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 MALLQ13021 153 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 SIGIRRQ6IA17 410 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR5AP2Q8NGF4 316 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PPA2Q9H2U2 334 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF581Q9P0T4 197 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 RFPL4AA6NLU0 287 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 RFPL4AL1F8VTS6 287 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 S100A11P31949 105 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PLP2Q04941 152 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 KCTD9Q7L273 389 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 APOBEC3DQ96AK3 386 aaPredicted RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 C5orf66Q9H5L9 145 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 AK3Q9UIJ7 227 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 MAB21L2Q9Y586 359 aa12.1□□□□□ -0.47
APOBEC3D-202ENST00000427494 PTPRBP23467 1997 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 DUS4LO95620 317 aaKnown RBP12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 MPGP29372 298 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 SRSF4Q08170 494 aaKnown RBP12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 BAMBIQ13145 260 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR51F2Q8NH61 342 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 SCGB3A2Q96PL1 93 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 CITED4Q96RK1 184 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 IRF2BPLQ9H1B7 796 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 OSGIN2Q9Y236 505 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF175Q9Y473 711 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 IL18BPO95998 194 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 CD8AP01732 235 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 SFTPBP07988 381 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 CHATP28329 748 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARPC4P59998 168 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 FGL1Q08830 312 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 PRDX4Q13162 271 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 CLN3Q13286 438 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 TMEM128Q5BJH2 165 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
APOBEC3D-202ENST00000427494 STARD10Q9Y365 291 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms