RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CNOT4O95628 575 aaKnown RBP14.14□□□□□ -0.15
PKP4-205ENST00000426248 ADRA2CP18825 462 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 FHITP49789 147 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 RPS11P62280 158 aaKnown RBP eCLIP14.14□□□□□ -0.15
PKP4-205ENST00000426248 RIMS4Q9H426 269 aaPredicted RBP14.14□□□□□ -0.15
PKP4-205ENST00000426248 TGIF2-C20orf24A0A0A6YYL0 155 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 BORCS7-ASMTA0A0B4J1R7 106 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 ITGA5P08648 1049 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 FGF5P12034 268 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 SLC10A1Q14973 349 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 SLC25A24Q6NUK1 477 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 CMBLQ96DG6 245 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 DHDHQ9UQ10 334 aa14.14□□□□□ -0.15
PKP4-205ENST00000426248 FCGR2CP31995 323 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 RAB1AP62820 205 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 ZNF117Q03924 483 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 ARFRP1Q13795 201 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
PKP4-205ENST00000426248 ELOVL1Q9BW60 279 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 TUBG2Q9NRH3 451 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 TCFL5Q9UL49 500 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
PKP4-205ENST00000426248 IL2RGP31785 369 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 TLE3Q04726 772 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 SRYQ05066 204 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 ZNF101Q8IZC7 436 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 BHLHE23Q8NDY6 225 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 PTBP3O95758 552 aaKnown RBP14.13□□□□□ -0.15
PKP4-205ENST00000426248 TMEM176BQ3YBM2 270 aaPredicted RBP14.13□□□□□ -0.15
PKP4-205ENST00000426248 SLC35D2Q76EJ3 337 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 FAM185AQ8N0U4 392 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 SIGLEC7Q9Y286 467 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 LY6G6EA0A0G2JKS1 128 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 APLNRP35414 380 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 DPY19L4Q7Z388 723 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 ALG12Q9BV10 488 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 SLC35B3Q9H1N7 401 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 U3KQA8 63 aa14.13□□□□□ -0.15
PKP4-205ENST00000426248 DFFBO76075 338 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 ZNF136P52737 540 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 C10orf91Q5T1B1 145 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 FJX1Q86VR8 437 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 SEH1LQ96EE3 360 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 GAB2Q9UQC2 676 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 CD59P13987 128 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 RPS2P15880 293 aaKnown RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 ACP1P24666 158 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 HTR2CP28335 458 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 RPL12P30050 165 aaKnown RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 VASH2Q86V25 355 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 NEU1Q99519 415 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 CBY3A6NI87 242 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 J3QRE1 110 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 TDGF1P13385 188 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 RBMXP38159 391 aaKnown RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 MST1LQ2TV78 715 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 TMEM182Q6ZP80 229 aaPredicted RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 SLC25A43Q8WUT9 341 aaPredicted RBP14.12□□□□□ -0.15
PKP4-205ENST00000426248 ZPBPQ9BS86 351 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 TIMM10BQ9Y5J6 103 aa14.12□□□□□ -0.15
PKP4-205ENST00000426248 MARCH11A6NNE9 402 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 IGHEP01854 428 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 RPS23P62266 143 aaKnown RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 INSM1Q01101 510 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 IAH1Q2TAA2 248 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 NCR3LG1Q68D85 454 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 SLC22A25Q6T423 547 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 DRAM2Q6UX65 266 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 COX15Q7KZN9 410 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 ADAMTS17Q8TE56 1095 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 SPACA9Q96E40 222 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 CHRNA9Q9UGM1 479 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HSF4Q9ULV5 492 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 A0A0B4J2E0 115 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 A0A1B0GX12 115 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 MBPP02686 304 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 THY1P04216 161 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 FTH1P19P0C7X4 201 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 CCL11P51671 97 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 PMPCAQ10713 525 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 ZNF141Q15928 474 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.11□□□□□ -0.15
PKP4-205ENST00000426248 WDR88Q6ZMY6 472 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 MDGA2Q7Z553 956 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 TMEM229BQ8NBD8 167 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 SLC25A44Q96H78 314 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 GNRHR2Q96P88 292 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 FBXL17Q9UF56 701 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BKO60814 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BJP06899 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 TRGC1P0CF51 173 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 SLC2A1P11166 492 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BOP23527 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BBP33778 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 CYB561P49447 251 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BDP58876 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 HIST1H2BCP62807 126 aa14.11□□□□□ -0.15
PKP4-205ENST00000426248 IGLV3-21P80748 117 aaPredicted RBP14.11□□□□□ -0.15
PKP4-205ENST00000426248 NAAAQ02083 359 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms