RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 CD3EP07766 207 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 ANKRD34CP0C6C1 535 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 CDC20Q12834 499 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 MED30Q96HR3 178 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 HIST1H1DP16402 221 aaKnown RBP11.26□□□□□ -0.61
FGFR1-211ENST00000425967 LPAR6P43657 344 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
FGFR1-211ENST00000425967 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 PJVKQ0ZLH3 352 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 ZNF425Q6IV72 752 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 SRRQ9GZT4 340 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 DEFB108AA8MXU0 73 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 TCAPO15273 167 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 LYZL6O75951 148 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 LIMK1P53667 647 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 ST8SIA2Q92186 375 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 LHX9Q9NQ69 397 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 IL36GQ9NZH8 169 aa11.26□□□□□ -0.61
FGFR1-211ENST00000425967 GPANK1O95872 356 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
FGFR1-211ENST00000425967 FA2HQ7L5A8 372 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 RFESDQ8TAC1 157 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 NTNG2Q96CW9 530 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 GABRG3Q99928 467 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 AMDHD2Q9Y303 409 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 RAB5AP20339 215 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 AMTP48728 403 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 C19orf35Q6ZS72 473 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 MRGPREQ86SM8 312 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 LINC01555Q8NAE3 123 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 OIT3Q8WWZ8 545 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 ZNF71Q9NQZ8 489 aaPredicted RBP11.25□□□□□ -0.61
FGFR1-211ENST00000425967 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 PRR35P0CG20 571 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 COX7A1P24310 79 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 Q1RN00 199 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 RHBDD2Q6NTF9 364 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 TMEM65Q6PI78 240 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 UBALD1Q8TB05 177 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 WDR34Q96EX3 536 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 C4orf45Q96LM5 186 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 TSPAN32Q96QS1 320 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 AKR7A2O43488 359 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 PDCD1Q15116 288 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 CTF1Q16619 201 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 SLC16A12Q6ZSM3 486 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 C11orf42Q8N5U0 333 aa11.25□□□□□ -0.61
FGFR1-211ENST00000425967 LOXHD1Q8IVV2 1947 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 DDX60LQ5H9U9 1706 aaKnown RBP11.24□□□□□ -0.61
FGFR1-211ENST00000425967 ASPDHA6ND91 283 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 PYCARD-AS1I3L0S3 204 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 J3QR89 54 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 DNASE2O00115 360 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-211ENST00000425967 COL9A1P20849 921 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 Q3ZCU0 254 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 OR6S1Q8NH40 331 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 OR3A4PP47883 348 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 C11orf87Q6NUJ2 197 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 PWWP2BQ6NUJ5 590 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 CT55Q8WUE5 264 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 UCK1Q9HA47 277 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 COL18A1P39060 1754 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 OR4A8P0C604 315 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 ZNF141Q15928 474 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 GLDNQ6ZMI3 551 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-211ENST00000425967 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 RASL12Q9NYN1 266 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 TMEFF2Q9UIK5 374 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-211ENST00000425967 MPC1Q9Y5U8 109 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 GALP22466 123 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 AVPR2P30518 371 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 SP6Q3SY56 376 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 DPF1Q92782 380 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 TMEM208Q9BTX3 173 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 ZNF385DQ9H6B1 395 aa11.24□□□□□ -0.61
FGFR1-211ENST00000425967 BTAF1O14981 1849 aa11.23□□□□□ -0.61
FGFR1-211ENST00000425967 TMEM272A0A1B0GTI8 110 aa11.23□□□□□ -0.61
FGFR1-211ENST00000425967 PLPP3O14495 311 aa11.23□□□□□ -0.61
FGFR1-211ENST00000425967 PDCD6O75340 191 aa11.23□□□□□ -0.61
FGFR1-211ENST00000425967 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
FGFR1-211ENST00000425967 GALNSP34059 522 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms