RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 B3GALT1Q9Y5Z6 326 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PRSS44E7EML9 344 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 SCRG1O75711 98 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PRF1P14222 555 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PNLIPP16233 465 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 MSR1P21757 451 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 RHBDD2Q6NTF9 364 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 HSD17B11Q8NBQ5 300 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 GJC3Q8NFK1 279 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 CD300LFQ8TDQ1 290 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF385AQ96PM9 386 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 NAA11Q9BSU3 229 aaPredicted RBP6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 AKIRIN1Q9H9L7 192 aaPredicted RBP6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 SPACA1Q9HBV2 294 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 PARP11Q9NR21 331 aa6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 NCOA6Q14686 2063 aaPredicted RBP6.59□□□□□ -1.35
SMARCC1-202ENST00000425518 DEDDO75618 318 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 DHRS3O75911 302 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 S100A9P06702 114 aaKnown RBP6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 PTGDSP41222 190 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 CAMLGP49069 296 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 HABP2Q14520 560 aaPredicted RBP6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 RAB30Q15771 203 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 PHYHD1Q5SRE7 291 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 RBMS3Q6XE24 437 aaKnown RBP6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 CPEB2Q7Z5Q1 589 aaKnown RBP6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 BATF2Q8N1L9 274 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 OR2M3Q8NG83 312 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 IP6K3Q96PC2 410 aa6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM212BQ9NTI7 297 aaPredicted RBP6.59□□□□□ -1.36
SMARCC1-202ENST00000425518 FER1L5A0AVI2 2057 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 PQLC2LA1A4F0 135 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 LINC01387J3KSC0 135 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 M0R135 149 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SGCEO43556 437 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ACAA1P09110 424 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 NAT2P11245 290 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 CCL1P22362 96 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 THBS4P35443 961 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 B2MP61769 119 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RSU1Q15404 277 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM268Q5VZI3 342 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 LYZL2Q7Z4W2 148 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SKA3Q8IX90 412 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF799Q96GE5 643 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 GNRHR2Q96P88 292 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 LIME1Q9H400 295 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 FANCFQ9NPI8 374 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 GHRLQ9UBU3 117 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 PISDQ9UG56 409 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ANXA10Q9UJ72 324 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 FBXO7Q9Y3I1 522 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 C7orf77A4D0Y5 90 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 A6NLC8 198 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 HEXAP06865 529 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 CTSDP07339 412 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF728P0DKX0 622 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF14P17017 642 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 PTAFRP25105 342 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 CTAG1AP78358 180 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 GUK1Q16774 197 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 EIF2S3LQ2VIR3 472 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RAET1LQ5VY80 246 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ADAM5Q6NVV9 412 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 CRIP3Q6Q6R5 217 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 OPN5Q6U736 354 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 WDSUB1Q8N9V3 476 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 OR5L1Q8NGL2 311 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RTN4IP1Q8WWV3 396 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 HAS2Q92819 552 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RASL10BQ96S79 203 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RSRP1Q9BUV0 290 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ATG2AQ2TAZ0 1938 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 AQP7P3A6NL99 342 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 NPIPA2E9PIF3 369 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 NPIPA3F8WFD2 350 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 IFNA4P05014 189 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ARG1P05089 322 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 OR13C7P0DN81 318 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF44P15621 663 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC35A1P78382 337 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SURF2Q15527 256 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SNAI3Q3KNW1 292 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RPUSD3Q6P087 351 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF574Q6ZN55 896 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC22A8Q8TCC7 542 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 RHBDD1Q8TEB9 315 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SSC4DQ8WTU2 575 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF837Q96EG3 531 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 AK3Q9UIJ7 227 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 KPTNQ9Y664 436 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 SHANK1Q9Y566 2161 aa6.58□□□□□ -1.36
SMARCC1-202ENST00000425518 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PPH5 198 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms