RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ALDH3B1P43353 468 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 CARTPTQ16568 116 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
SHOX2-202ENST00000425436 AWAT2Q6E213 333 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 NAA40Q86UY6 237 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 LILRB1Q8NHL6 650 aaPredicted RBP13.42□□□□□ -0.26
SHOX2-202ENST00000425436 SPSB1Q96BD6 273 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 TECTBQ96PL2 329 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 GPER1Q99527 375 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 TMEM204Q9BSN7 226 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 MOV10Q9HCE1 1003 aaKnown RBP13.42□□□□□ -0.26
SHOX2-202ENST00000425436 PIGLQ9Y2B2 252 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 MRPS28Q9Y2Q9 187 aaKnown RBP13.42□□□□□ -0.26
SHOX2-202ENST00000425436 TMEM14DPA8MWL7 114 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 SHISA9B4DS77 424 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 PRAF2O60831 178 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 CRYAAP02489 173 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 DBHP09172 617 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 PRKACBP22694 351 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 STOMP27105 288 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 QRFPP83859 136 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 C3orf36Q3SXR2 165 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 ZBTB37Q5TC79 503 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 PAQR4Q8N4S7 273 aaPredicted RBP13.41□□□□□ -0.26
SHOX2-202ENST00000425436 SLC30A7Q8NEW0 376 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 OR6F1Q8NGZ6 308 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 GPX8Q8TED1 209 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 SLC7A6Q92536 515 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 NRGNQ92686 78 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 REEP6Q96HR9 211 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 ALG5Q9Y673 324 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 ITPR2Q14571 2701 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
SHOX2-202ENST00000425436 ABCA12Q86UK0 2595 aa13.41□□□□□ -0.26
SHOX2-202ENST00000425436 LOC100509620A0A075B734 347 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 IGHV2OR16-5A0A0B4J2B6 119 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 MT-ND4P03905 459 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 H2AFB2P0C5Z0 115 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 VSIG8P0DPA2 414 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF35P13682 527 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 CNN3Q15417 329 aaKnown RBP13.4□□□□□ -0.26
SHOX2-202ENST00000425436 GLIPR1L1Q6UWM5 242 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF101Q8IZC7 436 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
SHOX2-202ENST00000425436 C1QTNF5Q9BXJ0 243 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 CST11Q9H112 138 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 ING3Q9NXR8 418 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 POU2F3Q9UKI9 436 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 ATP23Q9Y6H3 246 aa13.4□□□□□ -0.26
SHOX2-202ENST00000425436 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 GOSR1O95249 250 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 MELTFP08582 738 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 RCVRNP35243 200 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 APLNRP35414 380 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 TAS2R19P59542 299 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 HGFACQ04756 655 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 ARL6IP1Q15041 203 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 KISS1Q15726 138 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 PCGF3Q3KNV8 242 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 SPSB4Q96A44 273 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 S100A13Q99584 98 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 SOX7Q9BT81 388 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 LIME1Q9H400 295 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 PLEKHF2Q9H8W4 249 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 UBTD1Q9HAC8 227 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 AKAP6Q13023 2319 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 C7orf66A4D0T2 115 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 KDM4BO94953 1096 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 AKAIN1P0CW23 69 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 PTGFRP43088 359 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
SHOX2-202ENST00000425436 TBC1D28Q2M2D7 210 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 SNAI3Q3KNW1 292 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 CLVS2Q5SYC1 327 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 COLCA1Q6ZS62 124 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 GLCCI1Q86VQ1 547 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 AQP3Q92482 292 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 SEH1LQ96EE3 360 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 MED30Q96HR3 178 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 OPA3Q9H6K4 179 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 CDH20Q9HBT6 801 aa13.39□□□□□ -0.27
SHOX2-202ENST00000425436 CISD1Q9NZ45 108 aaKnown RBP13.39□□□□□ -0.27
SHOX2-202ENST00000425436 CSMD2Q7Z408 3487 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 A0A0B4J293 547 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 E7EQL1 145 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 RAB27BO00194 218 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 NAT2P11245 290 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 FAHP16930 419 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 CD300CQ08708 224 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 UNC119Q13432 240 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF260Q3ZCT1 412 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF672Q499Z4 452 aaPredicted RBP13.38□□□□□ -0.27
SHOX2-202ENST00000425436 BIVMQ86UB2 503 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms