RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OR6N2Q8NGY6 317 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 GORASP2Q9H8Y8 452 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 EFCAB1Q9HAE3 211 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 HILPDAQ9Y5L2 63 aa13.36□□□□□ -0.27
CHCHD3-202ENST00000423635 CHRM2P08172 466 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 IGHV1-8P0DP01 117 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 LMO1P25800 156 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 HMGA2P52926 109 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 SLC34A1Q06495 639 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 NKAPLQ5M9Q1 402 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 C10orf99Q6UWK7 81 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 ETV3LQ6ZN32 361 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 RASSF6Q6ZTQ3 369 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 ERI1Q8IV48 349 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 LIN7BQ9HAP6 207 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 BAIAP2Q9UQB8 552 aa13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 LSM4Q9Y4Z0 139 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-202ENST00000423635 K7N7A8 449 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 MAP2K3P46734 347 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 CEBPDP49716 269 aaPredicted RBP13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 THBS3P49746 956 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 UNQ9370/PRO34162Q6UXP9 181 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 LINC00471Q8N535 108 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 OR8B12Q8NGG6 310 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 OR4Q3Q8NH05 313 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 AKR1E2Q96JD6 320 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 ZNF488Q96MN9 340 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 TSSK6Q9BXA6 273 aa13.34□□□□□ -0.27
CHCHD3-202ENST00000423635 GASTP01350 101 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 LPLP06858 475 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 CCDC159P0C7I6 412 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 PIPP12273 146 aaPredicted RBP13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 GSTT1P30711 240 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 NUDT2P50583 147 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 DGCR2P98153 550 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 CASC10Q5T4H9 136 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 HES4Q9HCC6 221 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 IL1RAPQ9NPH3 570 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 STAB2Q8WWQ8 2551 aa13.33□□□□□ -0.28
CHCHD3-202ENST00000423635 HUWE1Q7Z6Z7 4374 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 DNAH1Q9P2D7 4330 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 H0YHG0 523 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 RAMP3O60896 148 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 GMNNO75496 209 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 KRT36O76013 467 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 FABP3P05413 133 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ACTA2P62736 377 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ACTG2P63267 376 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ACTC1P68032 377 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ACTA1P68133 377 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 ABCA11PQ4W5N1 156 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 DMRTC1Q5HYR2 192 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 KHDC1LQ5JSQ8 128 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 MOB3CQ70IA8 216 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 OR2T33Q8NG76 320 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 NRIP2Q9BQI9 281 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 NIPAL2Q9H841 368 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 TBC1D23Q9NUY8 699 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 VNN3Q9NY84 501 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 PCDHGB5Q9Y5G0 923 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 V9GYQ6 96 aa13.32□□□□□ -0.28
CHCHD3-202ENST00000423635 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 IFNGP01579 166 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 AMY1AP04745 511 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 AMY2AP04746 511 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 LYNP07948 512 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 PSMA6P60900 246 aaKnown RBP13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 PSME3P61289 254 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 IL18R1Q13478 541 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 SAMD4BQ5PRF9 694 aaKnown RBP13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 OSR2Q8N2R0 312 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 ZNF454Q8N9F8 522 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 OR9Q2Q8NGE9 314 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 CMC2Q9NRP2 79 aa13.31□□□□□ -0.28
CHCHD3-202ENST00000423635 LYSTQ99698 3801 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 IGHV2-26A0A0B4J1V2 119 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 ACOD1A6NK06 481 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 NXPH2O95156 264 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 HTR1DP28221 377 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 SLC6A1P30531 599 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 MYCNOSP40205 109 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 HAAOP46952 286 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 RIPPLY1Q0D2K3 151 aa13.3□□□□□ -0.28
CHCHD3-202ENST00000423635 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms