RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 IGKV1-27A0A075B6S5 117 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 LOC102725191A0A1B0GVB3 256 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 C9JQL5 133 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 H2AFB1P0C5Y9 115 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 PET100P0DJ07 73 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 EPHA8P29322 1005 aaPredicted RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 RPL12P30050 165 aaKnown RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 RPL35P42766 123 aaKnown RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 AKR1D1P51857 326 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 PDCD1Q15116 288 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 SPAG16Q8N0X2 631 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 SPEM1Q8N4L4 309 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 PP6455Q8WZ26 134 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 SMIM8Q96KF7 97 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 Q96M66 194 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 CNTNAP3Q9BZ76 1288 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 UBE2ZQ9H832 354 aaPredicted RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 FBXL17Q9UF56 701 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 PCDHGA1Q9Y5H4 931 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 ZIC3O60481 467 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 MTRF1O75570 445 aaKnown RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 BATF2Q8N1L9 274 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 SEC11CQ9BY50 192 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 SRXN1Q9BYN0 137 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 RCC2Q9P258 522 aaKnown RBP13.78□□□□□ -0.2
CDH1-202ENST00000422392 DNAJB11Q9UBS4 358 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 A0A0J9YW62 118 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 K7EPK0 472 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 SNAPINO95295 136 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 FCGR2CP31995 323 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 OTX1P32242 354 aaPredicted RBP13.77□□□□□ -0.21
CDH1-202ENST00000422392 CD80P33681 288 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 NTF4P34130 210 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 GGNBP1Q5YKI7 109 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 DHRS7BQ6IAN0 325 aaPredicted RBP13.77□□□□□ -0.21
CDH1-202ENST00000422392 ETV3LQ6ZN32 361 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 SGPP2Q8IWX5 399 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 TDHQ8IZJ6 230 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 FAM71E2Q8N5Q1 922 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 C2CD4CQ8TF44 421 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 BSCL2Q96G97 398 aaPredicted RBP13.77□□□□□ -0.21
CDH1-202ENST00000422392 AK3Q9UIJ7 227 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 ANXA10Q9UJ72 324 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 PADI1Q9ULC6 663 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 K7ESF4 209 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 SFTA3P0C7M3 94 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 OR5H8P0DN80 308 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 CAV2P51636 162 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 TMEM33P57088 247 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 FXYD4P59646 89 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 ERGIC1Q969X5 290 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 MARS2Q96GW9 593 aaKnown RBP13.77□□□□□ -0.21
CDH1-202ENST00000422392 DKKL1Q9UK85 242 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 MEMO1Q9Y316 297 aa13.77□□□□□ -0.21
CDH1-202ENST00000422392 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 UMODP07911 640 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZNF84P51523 738 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 PIGPP57054 158 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZNF468Q5VIY5 522 aaPredicted RBP13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZFP82Q8N141 532 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 SULT4A1Q9BR01 284 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 FOXD3Q9UJU5 478 aaPredicted RBP13.76□□□□□ -0.21
CDH1-202ENST00000422392 NXT1Q9UKK6 140 aaKnown RBP13.76□□□□□ -0.21
CDH1-202ENST00000422392 PTRH2Q9Y3E5 179 aaKnown RBP13.76□□□□□ -0.21
CDH1-202ENST00000422392 ZNF175Q9Y473 711 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 IGHV1-45A0A0A0MS14 117 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 RNASEK-C17orf49H0YIS7 233 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 OR8U9P0C7N5 309 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 LIFP15018 202 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 RSU1Q15404 277 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 SURF2Q15527 256 aaPredicted RBP13.76□□□□□ -0.21
CDH1-202ENST00000422392 PIGYQ3MUY2 71 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 HIST2H3PS2Q5TEC6 136 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 Q6ZRG5 221 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 OR8U1Q8NH10 309 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 AKR7LQ8NHP1 331 aa13.76□□□□□ -0.21
CDH1-202ENST00000422392 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 DEDDO75618 318 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 DIRAS3O95661 229 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 AKR1C3P42330 323 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 STARD6P59095 220 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 PDZK1IP1Q13113 114 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 TMEM268Q5VZI3 342 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 RAB11FIP2Q7L804 512 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms