RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MEGF9Q9H1U4 602 aa14.16□□□□□ -0.14
MSH6-203ENST00000420813 IKZF2Q9UKS7 526 aa14.16□□□□□ -0.14
MSH6-203ENST00000420813 ERICH4A6NGS2 130 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 RFPL4AA6NLU0 287 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 RFPL4AL1F8VTS6 287 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 H3BUX3 64 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 J3QT63 122 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 ANGPTL7O43827 346 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 NOS1APO75052 506 aaPredicted RBP14.15□□□□□ -0.14
MSH6-203ENST00000420813 SRSF10O75494 262 aaKnown RBP14.15□□□□□ -0.14
MSH6-203ENST00000420813 PGA5P0DJD9 388 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 CAPZA1P52907 286 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 ACTR3P61158 418 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 ESRRGP62508 458 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 EGR3Q06889 387 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 MFGE8Q08431 387 aaPredicted RBP14.15□□□□□ -0.14
MSH6-203ENST00000420813 PTGES3Q15185 160 aaKnown RBP14.15□□□□□ -0.14
MSH6-203ENST00000420813 C2orf68Q2NKX9 166 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 DMRTC1Q5HYR2 192 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 TMEM42Q69YG0 159 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 SLC35E4Q6ICL7 350 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 C11orf88Q6PI97 169 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 ZNF561Q8N587 486 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 OR51G2Q8NGK0 314 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 SSX3Q99909 188 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 PPA2Q9H2U2 334 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 C19orf12Q9NSK7 152 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 POMPQ9Y244 141 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 POLDIP2Q9Y2S7 368 aa14.15□□□□□ -0.14
MSH6-203ENST00000420813 DHRS7CA6NNS2 312 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 LOC110117498-PIK3R3F6TDL0 507 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 SLC1A7O00341 560 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 DLGAP1O14490 977 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 PRKYO43930 277 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 TSPAN15O95858 294 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 HAAOP46952 286 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 RPL31P62899 125 aaKnown RBP14.14□□□□□ -0.15
MSH6-203ENST00000420813 LRRC75BQ2VPJ9 315 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 CLVS2Q5SYC1 327 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 ZNF322Q6U7Q0 402 aaPredicted RBP14.14□□□□□ -0.15
MSH6-203ENST00000420813 Q6ZSR3 168 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 MEPCEQ7L2J0 689 aaKnown RBP14.14□□□□□ -0.15
MSH6-203ENST00000420813 CD177Q8N6Q3 437 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 PPP1R14AQ96A00 147 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 AJUBAQ96IF1 538 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 TTTY10Q9BZA0 68 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 RAB18Q9NP72 206 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 R4GMQ9 66 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 V9GYS6 101 aa14.14□□□□□ -0.15
MSH6-203ENST00000420813 hCG_1809904A0A1W2PP81 198 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 A0A1W2PPE2 198 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 A0A1W2PR64 198 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 A0A1W2PRV1 198 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 EBAG9O00559 213 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 SYNGR1O43759 233 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 MPZP25189 248 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 GABRA5P31644 462 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 PRDX2P32119 198 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 DAPP51397 102 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 CXCR4P61073 352 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 BCL2L15Q5TBC7 163 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 NXNL2Q5VZ03 156 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 SLC35F2Q8IXU6 374 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 MKXQ8IYA7 352 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 ELMOD2Q8IZ81 293 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 C17orf50Q8WW18 174 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 UTP4Q969X6 686 aaKnown RBP14.13□□□□□ -0.15
MSH6-203ENST00000420813 ZNF488Q96MN9 340 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 NRIP2Q9BQI9 281 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 RANBP3Q9H6Z4 567 aaPredicted RBP14.13□□□□□ -0.15
MSH6-203ENST00000420813 HES4Q9HCC6 221 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 USE1Q9NZ43 259 aa14.13□□□□□ -0.15
MSH6-203ENST00000420813 PRKDCP78527 4128 aaKnown RBP14.13□□□□□ -0.15
MSH6-203ENST00000420813 PLXNB1O43157 2135 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 PQLC2LA1A4F0 135 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 NXPH2O95156 264 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 KIR2DS4P43632 304 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 EFNB2P52799 333 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 EFNB1P98172 346 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 HERPUD1Q15011 391 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 AADACL4Q5VUY2 407 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 SLX4IPQ5VYV7 408 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 TMEM200BQ69YZ2 307 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 CRIP3Q6Q6R5 217 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 LIAT1Q6ZQX7 453 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 CALHM1Q8IU99 346 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 C11orf42Q8N5U0 333 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 DTX3Q8N9I9 347 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 OR14K1Q8NGZ2 314 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 SLC7A6OSQ96CW6 309 aaPredicted RBP14.12□□□□□ -0.15
MSH6-203ENST00000420813 APOL4Q9BPW4 351 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 ADGRL4Q9HBW9 690 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 GPR173Q9NS66 373 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 CLN6Q9NWW5 311 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 H2AFY2Q9P0M6 372 aaPredicted RBP14.12□□□□□ -0.15
MSH6-203ENST00000420813 OR52A1Q9UKL2 312 aa14.12□□□□□ -0.15
MSH6-203ENST00000420813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.12□□□□□ -0.159e-8■■■■□ 21.9
MSH6-203ENST00000420813 GTF2A1LQ9UNN4 478 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms