RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 HFEQ30201 348 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 ZNF774Q6NX45 483 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 TMEM54Q969K7 222 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 PCDHGA1Q9Y5H4 931 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 MTRF1O75570 445 aaKnown RBP12.63□□□□□ -0.39
HDAC9-208ENST00000417496 CCL4P13236 92 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 PVALBP20472 110 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-208ENST00000417496 STK11Q15831 433 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 ZNF239Q16600 458 aaKnown RBP12.63□□□□□ -0.39
HDAC9-208ENST00000417496 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 RHBDD1Q8TEB9 315 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 SAP25Q8TEE9 199 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-208ENST00000417496 TM2D1Q9BX74 207 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC9-208ENST00000417496 GHRLQ9UBU3 117 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 MLXQ9UH92 298 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 SHANK1Q9Y566 2161 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 OR5H8P0DN80 308 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 LIFP15018 202 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
HDAC9-208ENST00000417496 OTX1P32242 354 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-208ENST00000417496 FXYD4P59646 89 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 FAM189A2Q15884 450 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 HLA-BQ31612 363 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 MR1Q95460 341 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 CRLF2Q9HC73 371 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 IGHV1-45A0A0A0MS14 117 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 ZNF850A8MQ14 1090 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 K7EPK0 472 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 NDUFA2O43678 99 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 AKR1D1P51857 326 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 TMEM33P57088 247 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 GGNBP1Q5YKI7 109 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 TMEM156Q8N614 296 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 AKR7LQ8NHP1 331 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
HDAC9-208ENST00000417496 Q96M66 194 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 C1orf123Q9NWV4 160 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 ANXA10Q9UJ72 324 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 DKKL1Q9UK85 242 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
HDAC9-208ENST00000417496 PADI1Q9ULC6 663 aa12.62□□□□□ -0.39
HDAC9-208ENST00000417496 A0A0G2JMM0 328 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 A0A1W2PPB8 328 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 A0A1W2PRS3 328 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 KIR3DP1A8MWS1 328 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 DIRAS3O95661 229 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 FCGR2CP31995 323 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 CD80P33681 288 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 RPL35P42766 123 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 PIGPP57054 158 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 RSU1Q15404 277 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 C10orf91Q5T1B1 145 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 YRDCQ86U90 279 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 SGPP2Q8IWX5 399 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 OR5T2Q8NGG2 359 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 REEP6Q96HR9 211 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 SMIM8Q96KF7 97 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 ALKBH3Q96Q83 286 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 SULT4A1Q9BR01 284 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 RCC2Q9P258 522 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 FOXD3Q9UJU5 478 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 CCDC187A0A096LP49 1063 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 GEMIN2O14893 280 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 KLF7O75840 302 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 LCATP04180 440 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 PET100P0DJ07 73 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 B4GALT1P15291 398 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 AKR1C3P42330 323 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 NOVA1P51513 510 aaKnown RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 CAV2P51636 162 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 PHLDA2Q53GA4 152 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-208ENST00000417496 SPAG16Q8N0X2 631 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 ZFP82Q8N141 532 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 PRELID3BQ9Y3B1 194 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
HDAC9-208ENST00000417496 MED19A0JLT2 244 aaPredicted RBP12.6□□□□□ -0.39
HDAC9-208ENST00000417496 RNASEK-C17orf49H0YIS7 233 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 SGCEO43556 437 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms