RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TBX5Q99593 518 aa20.79■□□□□ 0.92
VEGFA-208ENST00000417285 V9GYS6 101 aa20.79■□□□□ 0.92
VEGFA-208ENST00000417285 A0A1W2PQ09 198 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 RNASEK-C17orf49H0YIS7 233 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 PSG2P11465 335 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 ATP6V1E1P36543 226 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 UBE2E1P51965 193 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 CDC42P60953 191 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 TMED1Q13445 227 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 DMRTC1Q5HYR2 192 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 TNFRSF14Q92956 283 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 RFKQ969G6 155 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 SDSLQ96GA7 329 aa20.78■□□□□ 0.92
VEGFA-208ENST00000417285 IGKV1D-17A0A075B6S4 117 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 TRBV23-1A0A0A0MS06 115 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 BTBD17A6NE02 478 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 DHRS7CA6NNS2 312 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 DLGAP1O14490 977 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 NPFFO15130 113 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 RPP14O95059 124 aaKnown RBP20.77■□□□□ 0.92
VEGFA-208ENST00000417285 ACSM1Q08AH1 577 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 SSX6Q7RTT6 188 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 ZNF573Q86YE8 665 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 OR10H4Q8NGA5 316 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 ZNF222Q9UK12 451 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 ORC6Q9Y5N6 252 aa20.77■□□□□ 0.92
VEGFA-208ENST00000417285 VWFP04275 2813 aa20.77■□□□□ 0.91
VEGFA-208ENST00000417285 A0A1B0GTI1 187 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 A0A1W2PQL4 384 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-208ENST00000417285 OCLNQ16625 522 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 TMEM42Q69YG0 159 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 CCDC121Q6ZUS5 278 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 ZNRF1Q8ND25 227 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 OR5D13Q8NGL4 314 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 OR14K1Q8NGZ2 314 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 GPR173Q9NS66 373 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 RNF114Q9Y508 228 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 MAB21L2Q9Y586 359 aa20.76■□□□□ 0.91
VEGFA-208ENST00000417285 METTL15A6NJ78 407 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 APOL3O95236 402 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 PAHP00439 452 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 TFF1P04155 84 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 HAAOP46952 286 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 SMIM21Q3B7S5 101 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 ZFP1Q6P2D0 407 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 Q6ZSR3 168 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 ZSCAN4Q8NAM6 433 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-208ENST00000417285 POC1AQ8NBT0 407 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 LINC01006Q8NI28 216 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 TRUB1Q8WWH5 349 aaKnown RBP20.75■□□□□ 0.91
VEGFA-208ENST00000417285 EME1Q96AY2 570 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 CITED1Q99966 193 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 IMPAD1Q9NX62 359 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 ZNRD1Q9P1U0 126 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■□□□ 12.6
VEGFA-208ENST00000417285 SLC22A13Q9Y226 551 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 POLDIP2Q9Y2S7 368 aa20.75■□□□□ 0.91
VEGFA-208ENST00000417285 SF3B6Q9Y3B4 125 aaKnown RBP20.75■□□□□ 0.91
VEGFA-208ENST00000417285 MEIOCA2RUB1 952 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 J3QT63 122 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 WIPF1O43516 503 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 NOS1APO75052 506 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-208ENST00000417285 SULT1C4O75897 302 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 CCL1P22362 96 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 ACP7Q6ZNF0 438 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 CATSPERDQ86XM0 798 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 TMEM185AQ8NFB2 350 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 OR5R1Q8NH85 324 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 PLEKHA1Q9HB21 404 aa20.74■□□□□ 0.91
VEGFA-208ENST00000417285 A0A1W2PPH5 198 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 H0YAE9 185 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 ALPLP05186 524 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 KPNB1Q14974 876 aaKnown RBP20.73■□□□□ 0.91
VEGFA-208ENST00000417285 TAF9Q16594 264 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 BRICD5Q6PL45 260 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 FAM220AQ7Z4H9 259 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 ZNF561Q8N587 486 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 USE1Q9NZ43 259 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 VPREB3Q9UKI3 123 aa20.73■□□□□ 0.91
VEGFA-208ENST00000417285 PQLC2LA1A4F0 135 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 RFPL4AA6NLU0 287 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 RFPL4AL1F8VTS6 287 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 SLC1A7O00341 560 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 TIMM23O14925 209 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 CLPXO76031 633 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 PGA5P0DJD9 388 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 PRDX2P32119 198 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 SAA4P35542 130 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 TGFBR2P37173 567 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 CAPZA1P52907 286 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 SRSF4Q08170 494 aaKnown RBP20.72■□□□□ 0.91
VEGFA-208ENST00000417285 ODF4Q2M2E3 257 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 MIDNQ504T8 468 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 C10orf67Q8IYJ2 551 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 CCDC54Q8NEL0 328 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 RORBQ92753 470 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 ADI1Q9BV57 179 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 C16orf95Q9H693 158 aa20.72■□□□□ 0.91
VEGFA-208ENST00000417285 A0A1W2PRD5 423 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 A0A1W2PRF3 423 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms