RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF823P16415 610 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 P2RY1P47900 373 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 CD81P60033 236 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 BTG2P78543 158 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 HIKESHIQ53FT3 197 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 EMC4Q5J8M3 183 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 VAX1Q5SQQ9 334 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 BCORP1Q8N888 145 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR5R1Q8NH85 324 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 ANKRD9Q96BM1 317 aaPredicted RBP12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 CTHRC1Q96CG8 243 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 BPNT1O95861 308 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 MBPP02686 304 aaPredicted RBP12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 HIST1H1DP16402 221 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 UCP2P55851 309 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 CHRFAM7AQ494W8 412 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 FIGLAQ6QHK4 219 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR2G3Q8NGZ4 309 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 NT5CQ8TCD5 201 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 HPSE2Q8WWQ2 592 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 TVP23CQ96ET8 276 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 SNHG12Q9BXW3 62 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 GPR87Q9BY21 358 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 PILRAQ9UKJ1 303 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 STRAPQ9Y3F4 350 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 A8MVM7 634 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 HSD17B6O14756 317 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 RAB38P57729 211 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 JOSD1Q15040 202 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 Q6ZSR6 202 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 SULF2Q8IWU5 870 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 LFNGQ8NES3 379 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR13H1Q8NG92 308 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 TOMM40LQ969M1 308 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 LMF2Q9BU23 707 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC17A4Q9Y2C5 497 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 MRPS28Q9Y2Q9 187 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 FIGNL2A6NMB9 653 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 H2BFMP0C1H6 154 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 PGA3P0DJD8 388 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 EDN3P14138 238 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 ROM1Q03395 351 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 C1orf140Q5VVS0 124 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 C1orf87Q8N0U7 546 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 G6PC2Q9NQR9 355 aa12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-204ENST00000416649 E5RGE8 158 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 FUT3P21217 361 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 TUBG1P23258 451 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR3A4PP47883 348 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM50BP56557 158 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 QRFPP83859 136 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 FMODQ06828 376 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR9A4Q8NGU2 314 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 EMG1Q92979 244 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 VSTM2LQ96N03 204 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 CUTCQ9NTM9 273 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 NSG2Q9Y328 171 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 A6NNC1 897 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 FTCDNL1E5RQL4 147 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 GLIPR1P48060 266 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 NPRL2Q8WTW4 380 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 HAS2Q92819 552 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 GINS3Q9BRX5 216 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 AK3Q9UIJ7 227 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 RHBDD3Q9Y3P4 386 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 A6NIZ1 184 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 MARCH11A6NNE9 402 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 AMBPP02760 352 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 ZNF20P17024 532 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 HSD11B1P28845 292 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 RABIFP47224 123 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 RAP1BP61224 184 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 GLO1Q04760 184 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 TSPO2Q5TGU0 170 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 CA13Q8N1Q1 262 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 LYRM4Q9HD34 91 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 OSGIN2Q9Y236 505 aa12.95□□□□□ -0.34
NCKIPSD-204ENST00000416649 NCOR1O75376 2440 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 SEMA4FO95754 770 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC35E2P0CK97 266 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CT45A8P0DMV1 189 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CT45A9P0DMV2 189 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 DRD1P21728 446 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CLEC12BQ2HXU8 276 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CT45A2Q5DJT8 189 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms