RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TSPO2Q5TGU0 170 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 C11orf40Q8WZ69 217 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 LAT2Q9GZY6 243 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 PSENENQ9NZ42 101 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
SCN1B-202ENST00000415950 KLHDC2Q9Y2U9 406 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 TBX19O60806 448 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CNIH1O95406 144 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 KRASP01116 189 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CTRB1P17538 263 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 GALP22466 123 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 THEM4Q5T1C6 240 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CTRB2Q6GPI1 263 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF574Q6ZN55 896 aaPredicted RBP11.52□□□□□ -0.57
SCN1B-202ENST00000415950 EDAQ92838 391 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 TSPAN32Q96QS1 320 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 PRRX2Q99811 253 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CNTD2Q9H8S5 307 aa11.52□□□□□ -0.57
SCN1B-202ENST00000415950 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 TNFRSF10CO14798 259 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 H2BFSP57053 126 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 INSM1Q01101 510 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF92Q03936 586 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 TMEM255AQ5JRV8 349 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 C4orf51C9J302 202 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 MEOX2P50222 304 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 RAB1AP62820 205 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 RPL11P62913 178 aaKnown RBP11.51□□□□□ -0.57
SCN1B-202ENST00000415950 ELFN2Q5R3F8 820 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 SPATA46Q5T0L3 261 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 ATRAIDQ6UW56 229 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-202ENST00000415950 PRSS27Q9BQR3 290 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 KCNIP2Q9NS61 270 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 CCL11P51671 97 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 FOXF1Q12946 379 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 PRDX4Q13162 271 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 TMEM229BQ8NBD8 167 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
SCN1B-202ENST00000415950 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 ST6GALNAC2Q9UJ37 374 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 SLC17A4Q9Y2C5 497 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 TIMM10BQ9Y5J6 103 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
SCN1B-202ENST00000415950 TUBAL3A6NHL2 446 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 HMSDA8MTL9 139 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 SLC25A6P12236 298 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 SLC25A30Q5SVS4 291 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 MSL2Q9HCI7 577 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 UQCC1Q9NVA1 299 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 CADP27708 2225 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 A0A1W2PR80 420 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 SEC14L6B5MCN3 397 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 OR8G1Q15617 311 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ZMIZ1Q9ULJ6 1067 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 DOCK10Q96BY6 2186 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 PIN1P1O15428 100 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 DHHO43323 396 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 VAMP5O95183 116 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 CTXN2P0C2S0 81 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 TFF2Q03403 129 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF816Q0VGE8 651 aaPredicted RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 INPP5JQ15735 1006 aaPredicted RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 PLCE1Q9P212 2302 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ZNF117Q03924 483 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 PUSL1Q8N0Z8 303 aaKnown RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 ADAD2Q8NCV1 583 aaKnown RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 DOCK7Q96N67 2140 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 AMELYQ99218 206 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 MRPS18AQ9NVS2 196 aaKnown RBP11.5□□□□□ -0.57
SCN1B-202ENST00000415950 TBX21Q9UL17 535 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 CEP350Q5VT06 3117 aa11.5□□□□□ -0.57
SCN1B-202ENST00000415950 GPR37O15354 613 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 PMCHP20382 165 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 COX5AP20674 150 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 C6orf201Q7Z4U5 140 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 SLC25A38Q96DW6 304 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 THOC3Q96J01 351 aaKnown RBP11.49□□□□□ -0.57
SCN1B-202ENST00000415950 RAB33BQ9H082 229 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 B3GAT1Q9P2W7 334 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 INTS1Q8N201 2190 aaKnown RBP11.49□□□□□ -0.57
SCN1B-202ENST00000415950 A0A1W2PPH5 198 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 BTBD17A6NE02 478 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 CHEK1O14757 476 aa11.49□□□□□ -0.57
SCN1B-202ENST00000415950 YKT6O15498 198 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms