RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
CPNE1-208ENST00000414711 VCXQ9H320 206 aa12.51□□□□□ -0.41
CPNE1-208ENST00000414711 VCX3BQ9H321 246 aa12.51□□□□□ -0.41
CPNE1-208ENST00000414711 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-208ENST00000414711 ORC6Q9Y5N6 252 aa12.51□□□□□ -0.41
CPNE1-208ENST00000414711 CDIPTO14735 213 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 ACAA1P09110 424 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-208ENST00000414711 GSSP48637 474 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 SLC25A1P53007 311 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 ERVFRD-1P60508 538 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 FHL1Q13642 323 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 ABCA11PQ4W5N1 156 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 LDLRAD2Q5SZI1 272 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 OGFRL1Q5TC84 451 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-208ENST00000414711 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 OAFQ86UD1 273 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 CBR4Q8N4T8 237 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 C11orf42Q8N5U0 333 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 PACRGLQ8N7B6 248 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 TMEM185AQ8NFB2 350 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 AKR1E2Q96JD6 320 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 PITX2Q99697 317 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 KRT84Q9NSB2 600 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 USE1Q9NZ43 259 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
CPNE1-208ENST00000414711 hCG_1809904A0A1W2PP81 198 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 A0A1W2PPE2 198 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 A0A1W2PPH5 198 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 A0A1W2PR64 198 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 A0A1W2PRV1 198 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 PSMB11A5LHX3 300 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ODF3BA8MYP8 253 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 H3BUI4 141 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 EI24O14681 340 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ANOS1P23352 680 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 PEX2P28328 305 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 DAPP51397 102 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ALDH3A2P51648 485 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 LRRC36Q1X8D7 754 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ZBED5Q49AG3 693 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 GLYATL3Q5SZD4 288 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 LPCAT4Q643R3 524 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 KDM4DQ6B0I6 523 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 OR13C2Q8NGS9 318 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 CAPSLQ8WWF8 208 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 NIPSNAP1Q9BPW8 284 aa12.49□□□□□ -0.41
CPNE1-208ENST00000414711 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
CPNE1-208ENST00000414711 ANKRD30BLA7E2S9 258 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 FAM90A22PA8MWA6 464 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 M0R135 149 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 SOCS2O14508 198 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 CDC42EP2O14613 210 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 ALPLP05186 524 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 CD14P08571 375 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 CENPAP49450 140 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 TPTEP56180 551 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 KRR1Q13601 381 aaKnown RBP12.48□□□□□ -0.41
CPNE1-208ENST00000414711 RFX4Q33E94 735 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 RASSF6Q6ZTQ3 369 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 ZNF329Q86UD4 541 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 LINC00346Q8IVM7 164 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 TLNRD1Q9H1K6 362 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 LIN7BQ9HAP6 207 aa12.48□□□□□ -0.41
CPNE1-208ENST00000414711 PLECQ15149 4684 aaKnown RBP12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-208ENST00000414711 CCL24O00175 119 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 IMPA2O14732 288 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 PTP4A3O75365 173 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 NDUFB2O95178 105 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SNRNP70P08621 437 aaKnown RBP12.47□□□□□ -0.41
CPNE1-208ENST00000414711 PGA5P0DJD9 388 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 OSMP13725 252 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 CCL3L1P16619 93 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 GABRA2P47869 451 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 ENTPD1P49961 510 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 OR12D2P58182 307 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 RPL31P62899 125 aaKnown RBP12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SNCBQ16143 134 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SLC18B1Q6NT16 456 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SMARCD3Q6STE5 483 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SLC29A1Q99808 456 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 NUAK2Q9H093 628 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 PNRC2Q9NPJ4 139 aaKnown RBP12.47□□□□□ -0.41
CPNE1-208ENST00000414711 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
CPNE1-208ENST00000414711 SIGLEC7Q9Y286 467 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms