RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 PRKACAP17612 351 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 RAB35Q15286 201 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 FAM74A3Q4VXF1 159 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF774Q6NX45 483 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 SPSB1Q96BD6 273 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 LIME1Q9H400 295 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 DNAJB11Q9UBS4 358 aa13.83□□□□□ -0.19
HOXD3-202ENST00000410016 ZNF716A6NP11 495 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 ANGPTL7O43827 346 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 AKR1C2P52895 323 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 AKR1C1Q04828 323 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 RBM39Q14498 530 aaKnown RBP13.83□□□□□ -0.2
HOXD3-202ENST00000410016 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 PLEKHN1Q494U1 663 aaPredicted RBP13.83□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF585AQ6P3V2 769 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 GGNQ86UU5 652 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 REEP6Q96HR9 211 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 SGCZQ96LD1 299 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF2Q9BSG1 426 aaPredicted RBP13.83□□□□□ -0.2
HOXD3-202ENST00000410016 NKX6-2Q9C056 277 aaPredicted RBP13.83□□□□□ -0.2
HOXD3-202ENST00000410016 TMEM38BQ9NVV0 291 aa13.83□□□□□ -0.2
HOXD3-202ENST00000410016 TNRC6BQ9UPQ9 1833 aaKnown RBP13.83□□□□□ -0.2
HOXD3-202ENST00000410016 GJE1A6NN92 205 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 ABCD4O14678 606 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 IFNA2P01563 188 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 CST2P09228 141 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 TDGF1P13385 188 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 ADCYAP1P18509 176 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
HOXD3-202ENST00000410016 SPEM2Q0P670 501 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 MST1LQ2TV78 715 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 YRDCQ86U90 279 aaKnown RBP13.82□□□□□ -0.2
HOXD3-202ENST00000410016 OR1F12Q8NHA8 337 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 FAAP24Q9BTP7 215 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 ACKR4Q9NPB9 350 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 ANXA10Q9UJ72 324 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 C14orf166Q9Y224 244 aaKnown RBP13.82□□□□□ -0.2
HOXD3-202ENST00000410016 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
HOXD3-202ENST00000410016 SRD5A2P31213 254 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 PRSS12P56730 875 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 TAF9Q16594 264 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 PDSS1Q5T2R2 415 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 ASCL4Q6XD76 172 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 WDR5BQ86VZ2 330 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 OR4A4PQ8NGN8 299 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 METTL9Q9H1A3 318 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 HSF4Q9ULV5 492 aa13.82□□□□□ -0.2
HOXD3-202ENST00000410016 OR6C6A6NF89 314 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 CTSDP07339 412 aaPredicted RBP13.81□□□□□ -0.2
HOXD3-202ENST00000410016 RFPL3SP0C7P2 107 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 PATE4P0C8F1 98 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 ECI1P42126 302 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 RRADP55042 308 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 CARD18P57730 90 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 Q0VFX4 171 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 TMEM42Q69YG0 159 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 C1orf123Q9NWV4 160 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 EDARQ9UNE0 448 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 FAM230AA0A1W2PPH8 454 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 CCDC85CA6NKD9 419 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 ATP6V1G2-DDX39BF2Z307 99 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 TERTO14746 1132 aaKnown RBP13.81□□□□□ -0.2
HOXD3-202ENST00000410016 PET100P0DJ07 73 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF708P17019 499 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF32P17041 273 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 FOLR3P41439 243 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 C10orf91Q5T1B1 145 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 PEAR1Q5VY43 1037 aaPredicted RBP13.81□□□□□ -0.2
HOXD3-202ENST00000410016 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 IER2Q9BTL4 223 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 ZC4H2Q9NQZ6 224 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 AK3Q9UIJ7 227 aa13.81□□□□□ -0.2
HOXD3-202ENST00000410016 CRYM-AS1A6NIL9 109 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 GPR31O00270 319 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 SFTPBP07988 381 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 OR5H8P0DN80 308 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 HKR1P10072 659 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 B4GALT1P15291 398 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 CLDN15P56746 228 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 CHAF1BQ13112 559 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF169Q14929 603 aaPredicted RBP13.8□□□□□ -0.2
HOXD3-202ENST00000410016 RSU1Q15404 277 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 PABPC1L2AQ5JQF8 200 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 DHRS11Q6UWP2 260 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
HOXD3-202ENST00000410016 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 ADAMTS17Q8TE56 1095 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 ADGRG7Q96K78 797 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 CNTNAP3BQ96NU0 1288 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 CNTNAP3Q9BZ76 1288 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 LPAR3Q9UBY5 353 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 COL6A3P12111 3177 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 IGKV1-12A0A0C4DH73 117 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 PLATP00750 562 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 IGKV1D-12P01611 117 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 LCATP04180 440 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 467.5 ms