RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 TFF1P04155 84 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 EGR1P18146 543 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 SERPINB10P48595 397 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 EFNA4P52798 201 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 CLDN12P56749 244 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 DEFB113Q30KQ7 82 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 HES5Q5TA89 166 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 OR4D6Q8NGJ1 314 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 LRRC29Q8WV35 223 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 ZFAND2BQ8WV99 257 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 AQP3Q92482 292 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 THRSPQ92748 146 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 CNTD2Q9H8S5 307 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 ELL3Q9HB65 397 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
CHRNA1-204ENST00000409323 IGHV3OR15-7A0A075B7D8 119 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 IGKV1-12A0A0C4DH73 117 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 TMEM210A6NLX4 147 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 F8VVB4 439 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 F8VWA3 439 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 IGKV1D-12P01611 117 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 CD80P33681 288 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 NPBWR2P48146 333 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 SNU13P55769 128 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 FAM76BQ5HYJ3 339 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 USP43Q70EL4 1123 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ZNF573Q86YE8 665 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 TNFAIP8L1Q8WVP5 186 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 PHYHIPQ92561 330 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ITFG2Q969R8 447 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ZNF701Q9NV72 531 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 J3QT63 122 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ALX3O95076 343 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 SLC2A2P11168 524 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 RAB3BP20337 219 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 BCL3P20749 454 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 RPS19P39019 145 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ZP1P60852 638 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 MZT1Q08AG7 82 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 PDZK1IP1Q13113 114 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 P2RY14Q15391 338 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 HFEQ30201 348 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 CELF2-AS1Q8N7Q2 184 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 DEFB108BQ8NET1 73 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 RDH5Q92781 318 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 SLIRPQ9GZT3 109 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 NXF2Q9GZY0 626 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 NARFLQ9H6Q4 476 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 MTCH1Q9NZJ7 389 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 IL36RNQ9UBH0 155 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 FBXO9Q9UK97 447 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 ING4Q9UNL4 249 aa11.88□□□□□ -0.51
CHRNA1-204ENST00000409323 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 TRAV1-2A0A0B4J238 106 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 A0A0G2JK05 382 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 A0A1W2PP11 408 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 RP2O75695 350 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 ALDOBP05062 364 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 GATA4P43694 442 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 MTNR1BP49286 362 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 AWAT2Q6E213 333 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 OR5T2Q8NGG2 359 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 OR51F2Q8NH61 342 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 GSX2Q9BZM3 304 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 DCSTAMPQ9H295 470 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 RBFOX1Q9NWB1 397 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 MRPS28Q9Y2Q9 187 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 V9GY05 133 aa11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 ASH1LQ9NR48 2969 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-204ENST00000409323 NAV2Q8IVL1 2488 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 PPIHO43447 177 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 CLPXO76031 633 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 SFTPBP07988 381 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 INHBBP09529 407 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 PTGFRP43088 359 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 DGUOKQ16854 277 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 OR10K2Q6IF99 312 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 GLIPR1L1Q6UWM5 242 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 LYPD6Q86Y78 171 aa11.86□□□□□ -0.51
CHRNA1-204ENST00000409323 NKAIN3Q8N8D7 197 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms