RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 EPHA1P21709 976 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 IL11RAQ14626 422 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 HAGHQ16775 308 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 VHLLQ6RSH7 139 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 MRGPRX4Q96LA9 322 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 PILRBQ9UKJ0 227 aa13.9□□□□□ -0.18
CCDC85A-201ENST00000407595 A0A1W2PR80 420 aa13.9□□□□□ -0.19
CCDC85A-201ENST00000407595 G3V3Q6 166 aa13.9□□□□□ -0.19
CCDC85A-201ENST00000407595 S100A12P80511 92 aa13.9□□□□□ -0.19
CCDC85A-201ENST00000407595 PDCD1Q15116 288 aa13.9□□□□□ -0.19
CCDC85A-201ENST00000407595 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.19
CCDC85A-201ENST00000407595 SHANK1Q9Y566 2161 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 CD1AP06126 327 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 ZNF345Q14585 488 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 HIST2H3AQ71DI3 136 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 PLPP5Q8NEB5 264 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 SEMA6DQ8NFY4 1073 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 NRIP2Q9BQI9 281 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 OR5AC2Q9NZP5 309 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 DENND4CQ5VZ89 1909 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 A0A1W2PPC1 479 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 IKZF1Q13422 519 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 CEBPEQ15744 281 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 C4orf17Q53FE4 359 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 FAM209BQ5JX69 171 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 PLCXD3Q63HM9 321 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 RPUSD3Q6P087 351 aaKnown RBP13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 MAML2Q8IZL2 1156 aaPredicted RBP13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 GCNT2Q8N0V5 402 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 DMRTA2Q96SC8 542 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 NELFAQ9H3P2 528 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 GPR173Q9NS66 373 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 TRBV23-1A0A0A0MS06 115 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 PLPP3O14495 311 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 SRSF3P84103 164 aaKnown RBP13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 DHODHQ02127 395 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 GUK1Q16774 197 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 RAB33BQ9H082 229 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 ZCCHC4Q9H5U6 513 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 KCNK7Q9Y2U2 307 aa13.89□□□□□ -0.19
CCDC85A-201ENST00000407595 ABHD16AO95870 558 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 PRSS54Q6PEW0 395 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 ZNF695Q8IW36 515 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 CT55Q8WUE5 264 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 UNKLQ9H9P5 680 aaKnown RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 FBXL17Q9UF56 701 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 WNK2Q9Y3S1 2297 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 ZNF705GA8MUZ8 300 aaPredicted RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 MPTX1A8MV57 137 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 H3BMH7 237 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 PHF1O43189 567 aaPredicted RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 LYPD3O95274 346 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 SLC25A4P12235 298 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 ZBTB25P24278 435 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 TAF9Q16594 264 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 RSPO4Q2I0M5 234 aaPredicted RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 AWAT1Q58HT5 328 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 LY6G6FQ5SQ64 297 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 OR2Y1Q8NGV0 311 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 OR2AE1Q8NHA4 323 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 TCFL5Q9UL49 500 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 A0A1W2PP11 408 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 MEX3AA1L020 520 aaKnown RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 EIF3GO75821 320 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 CCL2P13500 99 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 GALNSP34059 522 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 ALDH3B1P43353 468 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 ZNF121P58317 390 aaPredicted RBP13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 HMGN3Q15651 99 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 MICBQ29980 383 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 HFEQ30201 348 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 SSX9Q7RTT3 188 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 CRLF2Q9HC73 371 aa13.88□□□□□ -0.19
CCDC85A-201ENST00000407595 RNF222A6NCQ9 220 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 HSPB2A8KAH6 182 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 BPNT1O95861 308 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 VSIG8P0DPA2 414 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 FAHP16930 419 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 NOVA1P51513 510 aaKnown RBP13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 HSPB2Q16082 182 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 RNF212Q495C1 297 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 RBMS3Q6XE24 437 aaKnown RBP13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 ETV3LQ6ZN32 361 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 SLC25A43Q8WUT9 341 aaPredicted RBP13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 PIGLQ9Y2B2 252 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 BPTFQ12830 3046 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 TRBV5-7A0A0A0MS05 114 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 C7orf77A4D0Y5 90 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 TAAR5O14804 337 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 EFSO43281 561 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 SFT2D2O95562 160 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 ZNF728P0DKX0 622 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 OR3A4PP47883 348 aa13.87□□□□□ -0.19
CCDC85A-201ENST00000407595 MALLQ13021 153 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms