RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 PARPBPQ9NWS1 579 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 PLEK2Q9NYT0 353 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 COMMD9Q9P000 198 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4Q9UBX2 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF407Q9C0G0 2248 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 MEIS3P1A6NDR6 274 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM235A6NFC5 223 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 F5H5K5 113 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 SGCEO43556 437 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 CDC14BO60729 498 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 RAMP1O60894 148 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 MPIG6BO95866 241 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 VSIG10L2P0DP72 767 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 NAT1P18440 290 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 ECI1P42126 302 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 OPCMLQ14982 345 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 CNN3Q15417 329 aaKnown RBP11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 OR5AS1Q8N127 324 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 PAQR4Q8N4S7 273 aaPredicted RBP11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 ARRDC1Q8N5I2 433 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM45BQ96B21 275 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 SPSB1Q96BD6 273 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 SELENOIQ9C0D9 397 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC23A1Q9UHI7 598 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 ATPIF1Q9UII2 106 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 TIMM10BQ9Y5J6 103 aa11.22□□□□□ -0.61
SMARCB1-203ENST00000407082 PLSCR5A0PG75 271 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 FAM221AA4D161 298 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 GOSR2O14653 212 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SMAD9O15198 467 aaKnown RBP11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 CYTIPO60759 359 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SYNGR4O95473 234 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF735P0CB33 412 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 PTGFRP43088 359 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 GFRA1P56159 465 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 TAS2R46P59540 309 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SEC61A1P61619 476 aaKnown RBP11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 UNC119Q13432 240 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 CLLU1Q5K131 121 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 ABLIM2Q6H8Q1 611 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 OR10K2Q6IF99 312 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 MUC20Q8N307 709 aaPredicted RBP11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 SEMA6DQ8NFY4 1073 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 OR1F12Q8NHA8 337 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 DVL3Q92997 716 aaPredicted RBP11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 UCN2Q96RP3 112 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 PHB2Q99623 299 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 OCSTAMPQ9BR26 566 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 DPCDQ9BVM2 203 aaPredicted RBP11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 CHST5Q9GZS9 411 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 KCNK15Q9H427 330 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM38BQ9NVV0 291 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF835Q9Y2P0 537 aa11.21□□□□□ -0.61
SMARCB1-203ENST00000407082 IGHV3-15A0A0B4J1V0 119 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 A0A0D9SG52 128 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SERPINE3A8MV23 424 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 MCRIP1C9JLW8 97 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 M0QYG6 137 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 AQP7O14520 342 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 RP2O75695 350 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 CRTAPO75718 401 aaPredicted RBP11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 ACTL6AO96019 429 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC2A1P11166 492 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 PPP3CBP16298 524 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 HLA-GP17693 338 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 CPT2P23786 658 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 CD34P28906 385 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 S100A11P31949 105 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 ARFRP1Q13795 201 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 KISS1Q15726 138 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 GFOD2Q3B7J2 385 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 ESCO2Q56NI9 601 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 VAX1Q5SQQ9 334 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 RFPL4BQ6ZWI9 263 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 LYG2Q86SG7 212 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 OR8H3Q8N146 312 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 LRRC18Q8N456 261 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms