RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-201ENST00000404210 NDUFS7O75251 213 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 CYB5AP00167 134 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 LHBP01229 141 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 CLEC2LP0C7M8 214 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 TMEM225BP0DP42 221 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 DAOP14920 347 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 CFPP27918 469 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 PTH2RP49190 550 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 MXD1Q05195 221 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 HFEQ30201 348 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 FAM166AQ6J272 317 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 WDR82Q6UXN9 313 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 ZNF826PQ6ZT77 177 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 C1orf87Q8N0U7 546 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 LRRC75A-AS1Q8N1F1 130 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 OR51F2Q8NH61 342 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 CCL17Q92583 94 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 HPS1Q92902 700 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 RFT1Q96AA3 541 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 C12orf43Q96C57 262 aaKnown RBP10.39□□□□□ -0.75
LINC00339-201ENST00000404210 RHOFQ9HBH0 211 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 A0A0G2JK05 382 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 H3BMQ9 156 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-201ENST00000404210 CDC14BO60729 498 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 RHBDL1O75783 438 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 KDM4BO94953 1096 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 IGHV4-39P01824 125 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 IRF2P14316 349 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 HTR2CP28335 458 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 POU3F4P49335 361 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 ATP5J2P56134 94 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 TMEM33P57088 247 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 OR10A3P58181 314 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 NR2C2APQ86WQ0 139 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 Q8NFD4 153 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 YIPF5Q969M3 257 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 SLC25A28Q96A46 364 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 S100A13Q99584 98 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 PCDHB16Q9NRJ7 776 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 RASL12Q9NYN1 266 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 TREM2Q9NZC2 230 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 MTCH1Q9NZJ7 389 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
LINC00339-201ENST00000404210 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
LINC00339-201ENST00000404210 HRNRQ86YZ3 2850 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-201ENST00000404210 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 SRRM5B3KS81 715 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 AIPO00170 330 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-201ENST00000404210 RP2O75695 350 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 FSTL3O95633 263 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 UBBP0CG47 229 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 PGA5P0DJD9 388 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 OR3A4PP47883 348 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 RORCP51449 518 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 CAPZA1P52907 286 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 CAV3P56539 151 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 GPR176Q14439 515 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 SPCS2Q15005 226 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 SFXN4Q6P4A7 337 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 TGIF2LYQ8IUE0 185 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 Q8IYB0 196 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 GCSAMQ8N6F7 178 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 OR5D18Q8NGL1 313 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 NDNFQ8TB73 568 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 TBC1D15Q8TC07 691 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 LRRC29Q8WV35 223 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 SLC25A46Q96AG3 418 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 CHODLQ9H9P2 273 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 IL36GQ9NZH8 169 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 STEAP1Q9UHE8 339 aa10.37□□□□□ -0.75
LINC00339-201ENST00000404210 CACNG2Q9Y698 323 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms