RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 LHX4Q969G2 390 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 RNFT2Q96EX2 444 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 WDFY2Q96P53 400 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 GAFA1Q96PS6 74 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 JMJD8Q96S16 334 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 SIRPDQ9H106 197 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 MOB1AQ9H8S9 216 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 ABCB9Q9NP78 766 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 TRIM36Q9NQ86 728 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACOXLQ9NUZ1 547 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 IMPAD1Q9NX62 359 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 USE1Q9NZ43 259 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 ONECUT1Q9UBC0 465 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 NLKQ9UBE8 527 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 KAAG1Q9UBP8 84 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 ENPP5Q9UJA9 477 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 RPUSD1Q9UJJ7 312 aaKnown RBP4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 GNG8Q9UK08 70 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 ORC6Q9Y5N6 252 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 SNX5Q9Y5X3 404 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 V9GYS6 101 aa4.76□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGKV1D-17A0A075B6S4 117 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 CENPVL3A0A0U1RRI6 287 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1B0GVI7 797 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 LOC107986453A0A1B0GWG9 222 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 FAM230AA0A1W2PPH8 454 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1W2PRD5 423 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1W2PRF3 423 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1W2PRM7 423 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 NKX6-3A6NJ46 265 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR5B21A6NL26 309 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR2AT4A6NND4 320 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 E9PQ18 207 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SYT7O43581 403 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 NDUFB3O43676 98 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 MTRF1O75570 445 aaKnown RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 BAG2O95816 211 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 PSG2P11465 335 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ATP6V1B1P15313 513 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 NDUFB7P17568 137 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 PRTN3P24158 256 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 HAAOP46952 286 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 MTNR1AP48039 350 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 CEBPDP49716 269 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR12D2P58182 307 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ISL1P61371 349 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SNRPGP62308 76 aaKnown RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 KLRD1Q13241 179 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC9A3R2Q15599 337 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ATPAF1Q5TC12 328 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZBTB37Q5TC79 503 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 GPR157Q5UAW9 335 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 METTL11BQ5VVY1 283 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMEM42Q69YG0 159 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF788Q6ZQV5 615 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 C9orf139Q6ZV77 190 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 KRT74Q7RTS7 529 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC36A1Q7Z2H8 476 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 VMO1Q7Z5L0 202 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ANGPTL5Q86XS5 388 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 CALHM1Q8IU99 346 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 PQLC1Q8N2U9 271 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 PNKDQ8N490 385 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 CD177Q8N6Q3 437 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 PNLDC1Q8NA58 520 aaKnown RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNRF1Q8ND25 227 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMEM185AQ8NFB2 350 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR5A2Q8NGI9 324 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR10AC1Q8NH08 325 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ANGPTL6Q8NI99 470 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZFAND2BQ8WV99 257 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 RFKQ969G6 155 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMIGD2Q96BF3 282 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 LGALS12Q96DT0 336 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 AMBNQ9NP70 447 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SIRT7Q9NRC8 400 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC25A10Q9UBX3 287 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF222Q9UK12 451 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 MAB21L2Q9Y586 359 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 GMPPBQ9Y5P6 360 aa4.75□□□□□ -1.65
HMGB1P20-201ENST00000402555 WNK1Q9H4A3 2382 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGKV1-27A0A075B6S5 117 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGHV1-69DA0A0B4J2H0 117 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A0U1RQK1 487 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1W2PQ09 198 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 DAPL1A0PJW8 107 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 PQLC2LA1A4F0 135 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 MEX3AA1L020 520 aaKnown RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMEM89A2RUT3 159 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ANKRD61A6NGH8 418 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 RFPL4AA6NLU0 287 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ANKRD65E5RJM6 399 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 RFPL4AL1F8VTS6 287 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 F8VVB4 439 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 F8VWA3 439 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 J3QLW9 94 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 J3QRE1 110 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms