RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 CAV3P56539 151 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 SNRPGP62308 76 aaKnown RBP13.03□□□□□ -0.32
ATG4B-203ENST00000400772 PRB3Q04118 309 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-203ENST00000400772 OCLNQ16625 522 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 TP53I3Q53FA7 332 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 ZNF573Q86YE8 665 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 CD177Q8N6Q3 437 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 KIR3DL3Q8N743 410 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 H1FXQ92522 213 aaKnown RBP13.03□□□□□ -0.32
ATG4B-203ENST00000400772 TNFRSF14Q92956 283 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 SDSLQ96GA7 329 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 MBOAT4Q96T53 435 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 SLC29A1Q99808 456 aa13.03□□□□□ -0.32
ATG4B-203ENST00000400772 ELL3Q9HB65 397 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-203ENST00000400772 A0A0U1RQK1 487 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 SYT7O43581 403 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 NDUFB7P17568 137 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 GABRB1P18505 474 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 MPZP25189 248 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 KIR3DL2P43630 455 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-203ENST00000400772 ANGPTL5Q86XS5 388 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 RDH10Q8IZV5 341 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 BATF2Q8N1L9 274 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 RNFT2Q96EX2 444 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 NRIP2Q9BQI9 281 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 ZNF747Q9BV97 191 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 S100A14Q9HCY8 104 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 GNG8Q9UK08 70 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATG4B-203ENST00000400772 PCDHGB1Q9Y5G3 927 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 TRRAPQ9Y4A5 3859 aa13.02□□□□□ -0.33
ATG4B-203ENST00000400772 ANKRD61A6NGH8 418 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 RNASEK-C17orf49H0YIS7 233 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 ERVK11-1P61568 191 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 CHIAQ9BZP6 476 aa13.01□□□□□ -0.33
ATG4B-203ENST00000400772 EXOGQ9Y2C4 368 aaKnown RBP13.01□□□□□ -0.33
ATG4B-203ENST00000400772 IGKV1-27A0A075B6S5 117 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 FAM181BA6NEQ2 426 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 EBAG9O00559 213 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 PRDX2P32119 198 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 CEBPDP49716 269 aaPredicted RBP13□□□□□ -0.33
ATG4B-203ENST00000400772 OR12D2P58182 307 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 NANOS3P60323 173 aaKnown RBP13□□□□□ -0.33
ATG4B-203ENST00000400772 C1orf122Q6ZSJ8 110 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 TMEM185AQ8NFB2 350 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 OR2G2Q8NGZ5 317 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 TRMT10AQ8TBZ6 339 aaKnown RBP13□□□□□ -0.33
ATG4B-203ENST00000400772 PKIBQ9C010 78 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 UNKLQ9H9P5 680 aaKnown RBP13□□□□□ -0.33
ATG4B-203ENST00000400772 FRRS1LQ9P0K9 344 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 POLDIP2Q9Y2S7 368 aa13□□□□□ -0.33
ATG4B-203ENST00000400772 LOC107986453A0A1B0GWG9 222 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 FAM230AA0A1W2PPH8 454 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 F8VVB4 439 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 F8VWA3 439 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 M0R1W7 72 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 OMGP23515 440 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 IER3P46695 156 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 IL24Q13007 206 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 KLRD1Q13241 179 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 SMIM21Q3B7S5 101 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 HCP5Q6MZN7 132 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 FDX2Q6P4F2 183 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 FIP1L1Q6UN15 594 aaKnown RBP12.99□□□□□ -0.33
ATG4B-203ENST00000400772 FAM220AQ7Z4H9 259 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 KCTD20Q7Z5Y7 419 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 C10orf67Q8IYJ2 551 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 ENTHD1Q8IYW4 607 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 PNKDQ8N490 385 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 CCDC54Q8NEL0 328 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 NPRL2Q8WTW4 380 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 LGALS12Q96DT0 336 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 C9orf16Q9BUW7 83 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 ADI1Q9BV57 179 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 CHST5Q9GZS9 411 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 GMPPBQ9Y5P6 360 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 POMT1Q9Y6A1 747 aa12.99□□□□□ -0.33
ATG4B-203ENST00000400772 A0A1W2PQ09 198 aa12.98□□□□□ -0.33
ATG4B-203ENST00000400772 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
ATG4B-203ENST00000400772 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
ATG4B-203ENST00000400772 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
ATG4B-203ENST00000400772 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
ATG4B-203ENST00000400772 SLC16A6O15403 523 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms