RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 THBS4P35443 961 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 RPUSD3Q6P087 351 aaKnown RBP12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 CLRN3Q8NCR9 226 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 DUX4Q9UBX2 424 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 ZFHX4Q86UP3 3567 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 A0A0U1RQV5 110 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 F8W036 122 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 CSTBP04080 98 aaKnown RBP12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 ZNF708P17019 499 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 SPINK2P20155 84 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 NFYBP25208 207 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 NPBWR1P48145 328 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 ACTBL2Q562R1 376 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 ANGPTL4Q9BY76 406 aa12.66□□□□□ -0.38
CCDC144A-205ENST00000399264 ONECUT2O95948 504 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 LPAR6P43657 344 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 SLC16A14Q7RTX9 510 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 RNF141Q8WVD5 230 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 SULT4A1Q9BR01 284 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 AK3Q9UIJ7 227 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 KIAA1549Q9HCM3 1950 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 C9JQL5 133 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 IGKV1D-12P01611 117 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 LCATP04180 440 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 TAS2R46P59540 309 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 FXYD4P59646 89 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 PABPC1L2AQ5JQF8 200 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 SLC23A3Q6PIS1 610 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 REEP6Q96HR9 211 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 Q96M66 194 aa12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 NXT1Q9UKK6 140 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-205ENST00000399264 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 GEMIN2O14893 280 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 HKR1P10072 659 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 CPT2P23786 658 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 ALDH3B1P43353 468 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SSR4P51571 173 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SUCLG1P53597 346 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 HIST1H3AP68431 136 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 OPN5Q6U736 354 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 MAML2Q8IZL2 1156 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 TM2D1Q9BX74 207 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 MED19A0JLT2 244 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 RAB19A4D1S5 217 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SGCEO43556 437 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 FARS2O95363 451 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 OR5H8P0DN80 308 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 FGF5P12034 268 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 DSCR4P56555 118 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 Q6ZPA2 131 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SMOC1Q9H4F8 434 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 HPF1Q9NWY4 346 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 PILRBQ9UKJ0 227 aa12.64□□□□□ -0.39
CCDC144A-205ENST00000399264 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 IFNA2P01563 188 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 KLK3P07288 261 aaPredicted RBP12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF32P17041 273 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 CBX5P45973 191 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 PHLDA2Q53GA4 152 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 SULF2Q8IWU5 870 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 LPAR3Q9UBY5 353 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 CXCL13O43927 109 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 MTRF1O75570 445 aaKnown RBP12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 LYL1P12980 280 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 CRYGSP22914 178 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 SCRN3Q0VDG4 424 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 RSU1Q15404 277 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 GGNBP1Q5YKI7 109 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 HLA-CQ95604 372 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ARL11Q969Q4 196 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ERGIC1Q969X5 290 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms