RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NRN1LQ496H8 165 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ANGPTL5Q86XS5 388 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 WBP1Q96G27 269 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-201ENST00000399126 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ING4Q9UNL4 249 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-201ENST00000399126 FCGR2AP12318 317 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 PMPCAQ10713 525 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 AWAT2Q6E213 333 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 FAAP20Q6NZ36 180 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 C17orf107Q6ZR85 190 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ZGRF1Q86YA3 2104 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF584Q8IVC4 421 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 CNEP1R1Q8N9A8 125 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ACBD4Q8NC06 268 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 PIGTQ969N2 578 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 REG4Q9BYZ8 158 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 A0A1W2PR80 420 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 GABARAPH6UMI1 98 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 OR3A2P47893 321 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 RAB1AP62820 205 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 FOXF2Q12947 444 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF585AQ6P3V2 769 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 PGAP1Q75T13 922 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 PCNPQ8WW12 178 aaKnown RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 GPR173Q9NS66 373 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SS18L1O75177 396 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 DHFRP00374 187 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SLC6A1P30531 599 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 CCR6P51684 374 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 QRFPP83859 136 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SSC4DQ8WTU2 575 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SARAFQ96BY9 339 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 FOXRED1Q96CU9 486 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 ABHD17AQ96GS6 310 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 C1orf147Q96MC9 270 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-201ENST00000399126 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 RELNP78509 3460 aa13.12□□□□□ -0.31
COL25A1-201ENST00000399126 SPTA1P02549 2419 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 GABRA1P14867 456 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 PAN3Q58A45 887 aaKnown RBP13.11□□□□□ -0.31
COL25A1-201ENST00000399126 PLET1Q6UQ28 207 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 GLIPR1L1Q6UWM5 242 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 FCAMRQ8WWV6 532 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 EXTL1Q92935 676 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 DPCDQ9BVM2 203 aaPredicted RBP13.11□□□□□ -0.31
COL25A1-201ENST00000399126 CHST5Q9GZS9 411 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 PRF1P14222 555 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 MPGP29372 298 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 THBS4P35443 961 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 ID4P47928 161 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 TSPAN5P62079 268 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 ACSF3Q4G176 576 aaPredicted RBP13.11□□□□□ -0.31
COL25A1-201ENST00000399126 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 Q6ZSR3 168 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 FJX1Q86VR8 437 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 SEMA6DQ8NFY4 1073 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 GPER1Q99527 375 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 NICN1Q9BSH3 213 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
COL25A1-201ENST00000399126 MRPS28Q9Y2Q9 187 aaKnown RBP13.11□□□□□ -0.31
COL25A1-201ENST00000399126 LYZL6O75951 148 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 H2AFB1P0C5Y9 115 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 STOMP27105 288 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 GIFP27352 417 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 FGL1Q08830 312 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 KISS1Q15726 138 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 FAM214BQ7L5A3 538 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF101Q8IZC7 436 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 PTTG3PQ9NZH4 202 aa13.1□□□□□ -0.31
COL25A1-201ENST00000399126 PURGQ9UJV8 347 aaKnown RBP13.1□□□□□ -0.31
COL25A1-201ENST00000399126 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms