RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 BLOC1S1P78537 153 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 ARF1P84077 181 aaKnown RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 PDSS1Q5T2R2 415 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 DRAM2Q6UX65 266 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 TMPRSS7Q7RTY8 843 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 TUSC5Q8IXB3 177 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR1S2Q8NGQ3 325 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 FGFBP3Q8TAT2 258 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 B4GALT7Q9UBV7 327 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 KIF25Q9UIL4 384 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 NUP50Q9UKX7 468 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 BOKQ9UMX3 212 aaPredicted RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 TIMM10BQ9Y5J6 103 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 LDLRAD4O15165 306 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 CD74P04233 296 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 TPT1P13693 172 aaKnown RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 THBS4P35443 961 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 LSM6P62312 80 aaKnown RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 PSG4Q00888 419 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 IGFBP7Q16270 282 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 PPP1R32Q7Z5V6 425 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 FADS6Q8N9I5 356 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR52H1Q8NGJ2 320 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR5M9Q8NGP3 310 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 DMRTA2Q96SC8 542 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 ADAT1Q9BUB4 502 aaKnown RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 MCTS1Q9ULC4 181 aaKnown RBP9.12□□□□□ -0.95
CPSF1P1-201ENST00000397477 PINLYPA6NC86 204 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 HS3ST1O14792 307 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 BCL2L11O43521 198 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR2F2O95006 317 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF17P17021 662 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 HAAOP46952 286 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PIGPP57054 158 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 CYCSP99999 105 aaKnown RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF92Q03936 586 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 MALLQ13021 153 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR2F1Q13607 317 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 HNF4GQ14541 408 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 DTX1Q86Y01 620 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 CCDC36Q8IYA8 594 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZDHHC22Q8N966 263 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 M1APQ8TC57 530 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PP6455Q8WZ26 134 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 LRRC46Q96FV0 321 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF700Q9H0M5 742 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 DEPPQ9NTK1 212 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PCDHB10Q9UN67 800 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 SHANK1Q9Y566 2161 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PHF1O43189 567 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 F12P00748 615 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF728P0DKX0 622 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 GPM6AP51674 278 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PLP2Q04941 152 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF169Q14929 603 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 SKA3Q8IX90 412 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 RDH5Q92781 318 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 SLAMF9Q96A28 289 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR10C1Q96KK4 312 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 AK3Q9UIJ7 227 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 PRR14LQ5THK1 2151 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 CRHP06850 196 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 EPHA1P21709 976 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 GNRHRP30968 328 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 SRD5A2P31213 254 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 CAV2P51636 162 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 IKZF1Q13422 519 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 TGIF1Q15583 401 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 MPPED2Q15777 294 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 RGS7BPQ6MZT1 257 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF565Q8N9K5 539 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR5AP2Q8NGF4 316 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR56B2PQ8NGI1 322 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR6K3Q8NGY3 331 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 HAS2Q92819 552 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 CHST5Q9GZS9 411 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 TNFSF18Q9UNG2 199 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 UBE2J1Q9Y385 318 aaPredicted RBP9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 FAM96BQ9Y3D0 163 aa9.11□□□□□ -0.95
CPSF1P1-201ENST00000397477 TRAV39A0A0B4J263 110 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 LOC102725191A0A1B0GVB3 256 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 MSGN1A6NI15 193 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 ARGFXA6NJG6 315 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 YKT6O15498 198 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 MED6O75586 246 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 IFNA2P01563 188 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 FKBP2P26885 142 aaKnown RBP9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 NTF4P34130 210 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR1C1Q15619 314 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 LPCAT3Q6P1A2 487 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 P4HA3Q7Z4N8 544 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 ARRDC1Q8N5I2 433 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZIC4Q8N9L1 334 aa9.1□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms