RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TK1P04183 234 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 CCDC159P0C7I6 412 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 ZNF728P0DKX0 622 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 IGHV1-8P0DP01 117 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 PIPP12273 146 aaPredicted RBP11.94□□□□□ -0.5
SEC13-206ENST00000397102 RRM2P31350 389 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
SEC13-206ENST00000397102 NUDT2P50583 147 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 DGCR2P98153 550 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 CEP78Q5JTW2 689 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 UNQ9370/PRO34162Q6UXP9 181 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.94□□□□□ -0.5
SEC13-206ENST00000397102 OR8B12Q8NGG6 310 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 FAM81AQ8TBF8 368 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 LIN7BQ9HAP6 207 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 ABCD2Q9UBJ2 740 aa11.94□□□□□ -0.5
SEC13-206ENST00000397102 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
SEC13-206ENST00000397102 H0YHG0 523 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 LPLP06858 475 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 COX4I1P13073 169 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 MAP2K3P46734 347 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 THBS3P49746 956 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 SF3A3Q12874 501 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEC13-206ENST00000397102 NKAPLQ5M9Q1 402 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 CASC10Q5T4H9 136 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 HACD2Q6Y1H2 254 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 LINC00471Q8N535 108 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 PYURFQ96I23 114 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 OR8B4Q96RC9 309 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 ZNF649Q9BS31 505 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 TBC1D23Q9NUY8 699 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 V9GYQ6 96 aa11.93□□□□□ -0.5
SEC13-206ENST00000397102 RAMP3O60896 148 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 GMNNO75496 209 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 GSTT1P30711 240 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 PSMA6P60900 246 aaKnown RBP11.92□□□□□ -0.5
SEC13-206ENST00000397102 ACTA2P62736 377 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 ACTG2P63267 376 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 ACTC1P68032 377 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 ACTA1P68133 377 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 IL18R1Q13478 541 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 ABCA11PQ4W5N1 156 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 CGB2Q6NT52 195 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 RASSF6Q6ZTQ3 369 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 NDNFQ8TB73 568 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 ITFG2Q969R8 447 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 MCUR1Q96AQ8 359 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 TSSK6Q9BXA6 273 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 GORASP2Q9H8Y8 452 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 EFCAB1Q9HAE3 211 aa11.92□□□□□ -0.5
SEC13-206ENST00000397102 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
SEC13-206ENST00000397102 J3QT63 122 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 K7N7A8 449 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 NOS1APO75052 506 aaPredicted RBP11.91□□□□□ -0.5
SEC13-206ENST00000397102 NXPH2O95156 264 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 IFNGP01579 166 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 FABP3P05413 133 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 LYNP07948 512 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 DOC2BQ14184 412 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 DMRTC1Q5HYR2 192 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 PLCXD3Q63HM9 321 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 MOB3CQ70IA8 216 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 OSR2Q8N2R0 312 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 OR9Q2Q8NGE9 314 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 MUC7Q8TAX7 377 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 ZNF714Q96N38 554 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 BTBD10Q9BSF8 475 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 SLC25A33Q9BSK2 321 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 POLDIP2Q9Y2S7 368 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 TENM2Q9NT68 2774 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 SACSQ9NZJ4 4579 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
SEC13-206ENST00000397102 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
SEC13-206ENST00000397102 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 ZNF3P17036 446 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 HAAOP46952 286 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 EDDM3BP56851 147 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 RPL23AP62750 156 aaKnown RBP11.9□□□□□ -0.5
SEC13-206ENST00000397102 SAMD4BQ5PRF9 694 aaKnown RBP11.9□□□□□ -0.5
SEC13-206ENST00000397102 OR2T33Q8NG76 320 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 OTOSQ8NHW6 89 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 NRIP2Q9BQI9 281 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 NIPAL2Q9H841 368 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
SEC13-206ENST00000397102 A0A0U1RQV5 110 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 PSMB11A5LHX3 300 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms