RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RNF170Q96K19 258 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 TLNRD1Q9H1K6 362 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 MTCH1Q9NZJ7 389 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 KLK11Q9UBX7 282 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 FZR1Q9UM11 496 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 H7C417 338 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SERPINA2P20848 420 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 GDNFP39905 211 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 HAAOP46952 286 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 GNG3P63215 75 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 SORDQ00796 357 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 IL24Q13007 206 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 GPR176Q14439 515 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 RGS7BPQ6MZT1 257 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 TMEM108Q6UXF1 575 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 OR51F2Q8NH61 342 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 FCAMRQ8WWV6 532 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 BBC3Q96PG8 261 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 PKIBQ9C010 78 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 MTFP1Q9UDX5 166 aa10.83□□□□□ -0.68
TRIM39-204ENST00000396548 ERRFI1Q9UJM3 462 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
TRIM39-204ENST00000396548 F8VVB4 439 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 F8VWA3 439 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 SULT1C2O00338 296 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 AKR7A2O43488 359 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF780AO75290 641 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-204ENST00000396548 GNLYP22749 145 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 NPBWR2P48146 333 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 FABP6P51161 128 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 BSPH1Q075Z2 132 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 C11orf53Q8IXP5 236 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 DMRTC2Q8IXT2 367 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-204ENST00000396548 GAL3ST1Q99999 423 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 TMEM100Q9NV29 134 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 ANKRD20A5PA0PJZ0 165 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 MFNGO00587 321 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 DEFA1P59665 94 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 DEFA3P59666 94 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 NHLRC3Q5JS37 347 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 SLC25A26Q70HW3 274 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 NRARPQ7Z6K4 114 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 DRAXINQ8NBI3 349 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-204ENST00000396548 MRPS24Q96EL2 167 aaKnown RBP10.82□□□□□ -0.68
TRIM39-204ENST00000396548 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 ADAT1Q9BUB4 502 aaKnown RBP10.82□□□□□ -0.68
TRIM39-204ENST00000396548 COQ3Q9NZJ6 369 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF581Q9P0T4 197 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 ANAPC10Q9UM13 185 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 SPEF1Q9Y4P9 236 aa10.82□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A27PA6NNH2 459 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SYNGR1O43759 233 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SSX5O60225 188 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 RSU1Q15404 277 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 CDNFQ49AH0 187 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 RNASE12Q5GAN4 147 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 NCMAPQ5T1S8 102 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 C19orf18Q8NEA5 215 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 OR56B1Q8NGI3 324 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ST8SIA4Q92187 359 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 NEDD4LQ96PU5 975 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 RTL8AQ9BWD3 113 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SELENOIQ9C0D9 397 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SCPEP1Q9HB40 452 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 RP1L1Q8IWN7 2480 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 HEATR1Q9H583 2144 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 LRP5LA4QPB2 252 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 PTBP3O95758 552 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 PLATP00750 562 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ACAA1P09110 424 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 GNB3P16520 340 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 BCL3P20749 454 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 MAB21L1Q13394 359 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 DYRK1AQ13627 763 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 FAM189A2Q15884 450 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 OLFML2AQ68BL7 652 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ALKBH2Q6NS38 261 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF573Q86YE8 665 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 OR51T1Q8NGJ9 327 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 COX4I2Q96KJ9 171 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 HIST1H2AAQ96QV6 131 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 URM1Q9BTM9 101 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ZMAT3Q9HA38 289 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 TMEM210A6NLX4 147 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 LYRM1O43325 122 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 GTF2F2P13984 249 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 HIST1H1DP16402 221 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 GCH1P30793 250 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 PRSS3P35030 304 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 KIR2DL3P43628 341 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 ERVK11-1P61568 191 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 TLE1Q04724 770 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 TRIM16LQ309B1 348 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 OSR2Q8N2R0 312 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms