RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CLN3Q13286 438 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 LPCAT3Q6P1A2 487 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 TMEM17Q86X19 198 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 ELMOD3Q96FG2 381 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 WDR89Q96FK6 387 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 GMPPAQ96IJ6 420 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 POM121L2Q96KW2 1035 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 REPIN1Q9BWE0 567 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 CLEC4MQ9H2X3 399 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 OPA3Q9H6K4 179 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 PLEKHJ1Q9NW61 149 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 TNRC6AQ8NDV7 1962 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 FREM2Q5SZK8 3169 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 PLSCR5A0PG75 271 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 FIGNL2A6NMB9 653 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 ZNF850A8MQ14 1090 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 IL18BPO95998 194 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 CCL2P13500 99 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 SSTR2P30874 369 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 OR3A3P47888 321 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 NOVA1P51513 510 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 PDZK1IP1Q13113 114 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 OR5M8Q8NGP6 311 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 TERB2Q8NHR7 220 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 MARCH1Q8TCQ1 289 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 MRPS24Q96EL2 167 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 ST6GALNAC5Q9BVH7 336 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 PAPOLGQ9BWT3 736 aaKnown RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 ZNF701Q9NV72 531 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 CLCF1Q9UBD9 225 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 HSF4Q9ULV5 492 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 IGKV1-12A0A0C4DH73 117 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 C9orf170A2RU37 121 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 L7N2F9 121 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 IGKV1D-12P01611 117 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 CEACAM1P13688 526 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 APLNRP35414 380 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 DEFB109BQ30KR1 87 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 HIKESHIQ53FT3 197 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 OSR2Q8N2R0 312 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 NAXEQ8NCW5 288 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
CBX3-202ENST00000396386 HEXA-AS1Q9H8Q6 139 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 FN3KRPQ9HA64 309 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 U3KQ87 197 aa12.92□□□□□ -0.34
CBX3-202ENST00000396386 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 M0R233 179 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 FPR2P25090 351 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 PRDX4Q13162 271 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 GRK1Q15835 563 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 TAF9Q16594 264 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
CBX3-202ENST00000396386 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
CBX3-202ENST00000396386 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 SCGB3A2Q96PL1 93 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 PHB2Q99623 299 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 PPA2Q9H2U2 334 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 EHFQ9NZC4 300 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 ZNF230Q9UIE0 474 aaPredicted RBP12.91□□□□□ -0.34
CBX3-202ENST00000396386 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 CEP250Q9BV73 2442 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 AQP7O14520 342 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 AKR1C4P17516 323 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 VAMP1P23763 118 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 CHATP28329 748 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 IL13RA1P78552 427 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 SIGIRRQ6IA17 410 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 ZDHHC23Q8IYP9 409 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 ZNF611Q8N823 705 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 OR5AP2Q8NGF4 316 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 OR13G1Q8NGZ3 307 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
CBX3-202ENST00000396386 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
CBX3-202ENST00000396386 FXYD6-FXYD2A0A087WZ82 144 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 PQLC2LA1A4F0 135 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 EFSO43281 561 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 CST4P01036 141 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 CXCL2P19875 107 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
CBX3-202ENST00000396386 NPY4RP50391 375 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 GMFBP60983 142 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 SEC61A1P61619 476 aaKnown RBP12.9□□□□□ -0.34
CBX3-202ENST00000396386 PIGYQ3MUY2 71 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 LHFPL1Q86WI0 220 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 OR51F2Q8NH61 342 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 FXYD6Q9H0Q3 95 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 AK3Q9UIJ7 227 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms