RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FAM221AA4D161 298 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 NGFP01138 241 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CBR1P16152 277 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 PI3P19957 117 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 PPP1CBP62140 327 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CTF1Q16619 201 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 FAAP20Q6NZ36 180 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 LILRA6Q6PI73 481 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CCDC190Q86UF4 302 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 IGHV3-64DA0A0J9YX35 117 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 C21orf140B9A014 251 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 GOSR1O95249 250 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 KRASP01116 189 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 RNF212Q495C1 297 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ZBTB37Q5TC79 503 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 ANKRD37Q7Z713 158 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 CA10Q9NS85 328 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 SIRT5Q9NXA8 310 aa4.88□□□□□ -1.63
VPS13C-204ENST00000395898 HIST1H1DP16402 221 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 LSM6P62312 80 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 STUMQ69YW2 141 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 UBE3DQ7Z6J8 389 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 NECAP1Q8NC96 275 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 MOB3AQ96BX8 217 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 C4orf45Q96LM5 186 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 DNAJB12Q9NXW2 375 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 GOLT1BQ9Y3E0 138 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 UBE2L5PA0A1B0GUS4 154 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 GALNSP34059 522 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 KLF3P57682 345 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 EXOSC2Q13868 293 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF141Q15928 474 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 WIPI1Q5MNZ9 446 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SPATA46Q5T0L3 261 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF793Q6ZN11 406 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 OR6X1Q8NH79 312 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ST8SIA4Q92187 359 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 AUNIPQ9H7T9 357 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RASL12Q9NYN1 266 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF318Q5VUA4 2279 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 hADV38S2A0JD32 116 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 FXYD1O00168 92 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PLPP3O14495 311 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 CISD3P0C7P0 127 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 EPHA2P29317 976 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RHBDD2Q6NTF9 364 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 LINC01555Q8NAE3 123 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PHYHIPLQ96FC7 376 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZFP64Q9NPA5 681 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF785A8K8V0 405 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PYCARD-AS1I3L0S3 204 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SPRY1O43609 319 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 GPANK1O95872 356 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ACTL6AO96019 429 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PAX5Q02548 391 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 LINC00303Q3SY05 128 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 Q7L0L9 218 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 GPR119Q8TDV5 335 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 WDFY2Q96P53 400 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 NIT2Q9NQR4 276 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 A0A0B4J203 849 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 IGHV1OR15-9A0A0B4J2B8 117 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZFPL1O95159 310 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RPL13AP40429 203 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RPS27P42677 84 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF117Q03924 483 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 FAM27D1Q5T7N8 215 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 C1orf174Q8IYL3 243 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PCNPQ8WW12 178 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM147Q9BVK8 224 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SLC26A1Q9H2B4 701 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SLC2A8Q9NY64 477 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 IL36GQ9NZH8 169 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 IGHV1OR21-1A0A087WYE8 117 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 CTDSPLO15194 276 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 CST4P01036 141 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 HNF1AP20823 631 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SLC25A35Q3KQZ1 300 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 TRILQ7L0X0 811 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 LSMEM1Q8N8F7 131 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SLIRPQ9GZT3 109 aaKnown RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 AKIP1Q9NQ31 210 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ARL2-SNX15V9GYD0 113 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 TNFSF14O43557 240 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 NTF3P20783 257 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 DRD3P35462 400 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 MEOX1P50221 254 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 BTNL3Q6UXE8 466 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 SLC24A4Q8NFF2 622 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 UCK1Q9HA47 277 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 UQCC1Q9NVA1 299 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 FLVCR2Q9UPI3 526 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF835Q9Y2P0 537 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 MPC1Q9Y5U8 109 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF320A2RRD8 509 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ATP6V1FQ16864 119 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PRR27Q6MZM9 219 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms