RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PLBD1Q6P4A8 553 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 Q6ZS46 218 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 KRT74Q7RTS7 529 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 KRT77Q7Z794 578 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 COMMD2Q86X83 199 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 POC1AQ8NBT0 407 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 REEP1Q9H902 201 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 PITPNC1Q9UKF7 332 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 TENM3Q9P273 2699 aa17.02■□□□□ 0.32
TRAF4-203ENST00000394925 PRR23D1E9PI22 279 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-203ENST00000394925 PRR23D2P0DMB1 279 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-203ENST00000394925 SSX2Q16385 188 aa17.02■□□□□ 0.32
TRAF4-203ENST00000394925 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.32
TRAF4-203ENST00000394925 DEFB107AQ8IZN7 70 aa17.02■□□□□ 0.32
TRAF4-203ENST00000394925 OR2T29Q8NH02 315 aa17.02■□□□□ 0.32
TRAF4-203ENST00000394925 FOXRED1Q96CU9 486 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-203ENST00000394925 TBL2Q9Y4P3 447 aaKnown RBP17.02■□□□□ 0.32
TRAF4-203ENST00000394925 A0A0U1RQV5 110 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 GSC2O15499 205 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 SYNGR1O43759 233 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 VDAC2P45880 294 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-203ENST00000394925 HCCSP53701 268 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 BLCAPP62952 87 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 RIPPLY1Q0D2K3 151 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 TMEM95Q3KNT9 176 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 LDLRAD2Q5SZI1 272 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 TRPM8Q7Z2W7 1104 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 BATF2Q8N1L9 274 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 WFDC9Q8NEX5 89 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 OR10G2Q8NGC3 310 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 MALSU1Q96EH3 234 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 FAM107BQ9H098 131 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 ACTR3BQ9P1U1 418 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 OR14J1Q9UGF5 321 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 LAMP5Q9UJQ1 280 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 PIGLQ9Y2B2 252 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 RYR3Q15413 4870 aa17.01■□□□□ 0.31
TRAF4-203ENST00000394925 MEX3AA1L020 520 aaKnown RBP17■□□□□ 0.31
TRAF4-203ENST00000394925 C17orf98A8MV24 154 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 ODF3BA8MYP8 253 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 K7EIL1 84 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 PSMD9O00233 223 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 NXPH2O95156 264 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 TK1P04183 234 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 PGA5P0DJD9 388 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 HAAOP46952 286 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 DLX6P56179 175 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 C11orf87Q6NUJ2 197 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 CD300LDQ6UXZ3 194 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 CALHM1Q8IU99 346 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 OR13D1Q8NGV5 346 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 OR51E1Q8TCB6 317 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 GPR84Q9NQS5 396 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 ZNF446Q9NWS9 450 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 FAM206AQ9NX38 181 aa17■□□□□ 0.31
TRAF4-203ENST00000394925 TMEM269A0A1B0GVZ9 245 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 TCRBV5S2A0A599 114 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 NRASP01111 189 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ATP6V1B1P15313 513 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ALOX5APP20292 161 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 DYNC1I2Q13409 638 aaKnown RBP16.99■□□□□ 0.31
TRAF4-203ENST00000394925 HSP90B2PQ58FF3 399 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ZNF684Q5T5D7 378 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 C16orf89Q6UX73 402 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 OR5AU1Q8NGC0 362 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 OR8B4Q96RC9 309 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 FEVQ99581 238 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 PBOV1Q9GZY1 135 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 MAGIXQ9H6Y5 334 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ARL8BQ9NVJ2 186 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 TAGLN3Q9UI15 199 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ENPP5Q9UJA9 477 aa16.99■□□□□ 0.31
TRAF4-203ENST00000394925 ACOD1A6NK06 481 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 J3QT63 122 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 PRODHO43272 600 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 PF4V1P10720 104 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-203ENST00000394925 RPS7P62081 194 aaKnown RBP16.98■□□□□ 0.31
TRAF4-203ENST00000394925 CD83Q01151 205 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 GINS1Q14691 196 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 SPATS1Q496A3 300 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 DEFB121Q5J5C9 76 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 ZNF626Q68DY1 528 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 LCN8Q6JVE9 175 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 ZNF573Q86YE8 665 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 CPOQ8IVL8 374 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 BBS1Q8NFJ9 593 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 TEAD3Q99594 435 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 DSCAML1Q8TD84 2053 aa16.98■□□□□ 0.31
TRAF4-203ENST00000394925 F2RL2O00254 374 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 NOS1APO75052 506 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-203ENST00000394925 ALDOBP05062 364 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 ZNF728P0DKX0 622 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 OR12D2P58182 307 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 OR11H6Q8NGC7 330 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 GIPC3Q8TF64 312 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 ITFG2Q969R8 447 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 NRIP2Q9BQI9 281 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 OCSTAMPQ9BR26 566 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 MUC13Q9H3R2 512 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms