RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 PAQR4Q8N4S7 273 aaPredicted RBP12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 GVQW1Q8N7I0 195 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 HIST1H2AAQ96QV6 131 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 FOXB1Q99853 325 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 OR2B2Q9GZK3 357 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 MFFQ9GZY8 342 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 PIGLQ9Y2B2 252 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
PPP3CA-202ENST00000394853 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 AKR7A2O43488 359 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 SEH1LQ96EE3 360 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 MOB1AQ9H8S9 216 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 PYCARD-AS1I3L0S3 204 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 Q5BKY6 102 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 OR5AS1Q8N127 324 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 CPT1CQ8TCG5 803 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 CITED1Q99966 193 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 MRPS28Q9Y2Q9 187 aaKnown RBP12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 IGKV1-9A0A0C4DH69 117 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 LYZL6O75951 148 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 APLNRP35414 380 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 LHX2P50458 406 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 SCGB2B2Q4G0G5 96 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 C1orf100Q5SVJ3 147 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 DOK3Q7L591 496 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 C15orf40Q8WUR7 153 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 SLCO5A1Q9H2Y9 848 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 TMEM38BQ9NVV0 291 aa12.22□□□□□ -0.45
PPP3CA-202ENST00000394853 GTF3C1Q12789 2109 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 CCL2P13500 99 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 NDUFB7P17568 137 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 MRPS34P82930 218 aaKnown RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 FLI1Q01543 452 aaPredicted RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 HGFACQ04756 655 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 RNPS1Q15287 305 aaKnown RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 OR52W1Q6IF63 320 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 FJX1Q86VR8 437 aa12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 FOXRED1Q96CU9 486 aaPredicted RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.45
PPP3CA-202ENST00000394853 WIPF3A6NGB9 483 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 SPCS3P61009 180 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 CDNFQ49AH0 187 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 TOR2AQ5JU69 321 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 OLFML2AQ68BL7 652 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 OR14K1Q8NGZ2 314 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 SPTSSAQ969W0 71 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 HSPB11Q9Y547 144 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 AKAP13Q12802 2813 aa12.21□□□□□ -0.46
PPP3CA-202ENST00000394853 hCG_1809904A0A1W2PP81 198 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 A0A1W2PPE2 198 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 A0A1W2PR64 198 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 C7orf66A4D0T2 115 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 HSPA12AO43301 675 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 GABRA1P14867 456 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 AP2S1P53680 142 aaPredicted RBP12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 C1QL2Q7Z5L3 287 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CPNE2Q96FN4 548 aaPredicted RBP12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 GPR35Q9HC97 309 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 GPR173Q9NS66 373 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CLEC5AQ9NY25 188 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 ING4Q9UNL4 249 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CBY3A6NI87 242 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 FAM90A27PA6NNH2 459 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 RAB27BO00194 218 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 FAUP35544 74 aaKnown RBP12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CLDN18P56856 261 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 PSG4Q00888 419 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 KLRB1Q12918 225 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 KRTCAP3Q53RY4 240 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 OR2A2Q6IF42 318 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 LYPD6Q86Y78 171 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 LIX1LQ8IVB5 337 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 PPP1R35Q8TAP8 253 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 BSCL2Q96G97 398 aaPredicted RBP12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 RAB22AQ9UL26 194 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 GAB2Q9UQC2 676 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 KIAA1549Q9HCM3 1950 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 ARID1AO14497 2285 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CCL21O00585 134 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 PDGFAP04085 211 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 AMY2AP04746 511 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 CSF1P09603 554 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 SELENOVP59797 346 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 PCBD1P61457 104 aa12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 ARF1P84077 181 aaKnown RBP12.2□□□□□ -0.46
PPP3CA-202ENST00000394853 UBE2V2Q15819 145 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms