RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 STK11Q15831 433 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
MKS1-202ENST00000393119 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 DNM1P46Q6ZS02 220 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 MTFP1Q9UDX5 166 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
MKS1-202ENST00000393119 ATRXP46100 2492 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 TMEM127O75204 238 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 MNDAP41218 407 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 LINC00303Q3SY05 128 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 ZNF260Q3ZCT1 412 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 RGS7BPQ6MZT1 257 aaPredicted RBP12.91□□□□□ -0.34
MKS1-202ENST00000393119 BTN2A1Q7KYR7 527 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 CALHM1Q8IU99 346 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 OR4C16Q8NGL9 310 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 PP6455Q8WZ26 134 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 WNT2BQ93097 391 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 FBXW5Q969U6 566 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 SDHAF2Q9NX18 166 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
MKS1-202ENST00000393119 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 GTF2F2P13984 249 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 RAB14P61106 215 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 GABRA6Q16445 453 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 FJX1Q86VR8 437 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
MKS1-202ENST00000393119 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
MKS1-202ENST00000393119 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
MKS1-202ENST00000393119 M0R233 179 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 PRKACAP17612 351 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 ARR3P36575 388 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 OR8B8Q15620 311 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 Q6ZT83 130 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 NLRC3Q7RTR2 1065 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 GIMAP1Q8WWP7 306 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 MAFIPQ8WZ33 124 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 C7orf50Q9BRJ6 194 aaKnown RBP12.89□□□□□ -0.35
MKS1-202ENST00000393119 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
MKS1-202ENST00000393119 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 SSX5O60225 188 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 CXADRP78310 365 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 PLP2Q04941 152 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 NSUN5P2Q63ZY6 315 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 OR51T1Q8NGJ9 327 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 OR10R2Q8NGX6 335 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 AQP3Q92482 292 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
MKS1-202ENST00000393119 PAPOLGQ9BWT3 736 aaKnown RBP12.89□□□□□ -0.35
MKS1-202ENST00000393119 ZNF436Q9C0F3 470 aaPredicted RBP12.89□□□□□ -0.35
MKS1-202ENST00000393119 GLS2Q9UI32 602 aa12.89□□□□□ -0.35
MKS1-202ENST00000393119 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 HPXP02790 462 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 NAT2P11245 290 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 MGMTP16455 207 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 ZNF14P17017 642 aaPredicted RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 APLNRP35414 380 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 SHEQ5VZ18 495 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 TMEM42Q69YG0 159 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 OR2T2Q6IF00 324 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 GABRG1Q8N1C3 465 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 SPSB4Q96A44 273 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 PLSCR5A0PG75 271 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 METTL21EPA6NDL7 271 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 CGAP01215 116 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 SERPINA5P05154 406 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 SFTPBP07988 381 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 NMBP08949 121 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 ANXA7P20073 488 aaKnown RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 RAB6AP20340 208 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 GABRR1P24046 479 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 CALCRP30988 508 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 SNU13P55769 128 aaKnown RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 OPCMLQ14982 345 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 OR51S1Q8NGJ8 323 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
MKS1-202ENST00000393119 TINAGQ9UJW2 476 aa12.88□□□□□ -0.35
MKS1-202ENST00000393119 F8VVB4 439 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 F8VWA3 439 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 ARPC1BO15143 372 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms