RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 DBX1A6NMT0 343 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 PDCD6O75340 191 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 FABP4P15090 132 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 FCER1GP30273 86 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 SLC25A30Q5SVS4 291 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 JMJD6Q6NYC1 403 aaPredicted RBP11.7□□□□□ -0.54
LCA5-202ENST00000392959 SEZ6L2Q6UXD5 910 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 PTP4A1Q93096 173 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 MCHR2Q969V1 340 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 ADAM20O43506 726 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ADAP1O75689 374 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 CALCRP30988 508 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 DRD3P35462 400 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 Q8IYB0 196 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ZNF707Q96C28 371 aaPredicted RBP11.69□□□□□ -0.54
LCA5-202ENST00000392959 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 KIF13AQ9H1H9 1805 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 LINC01387J3KSC0 135 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 LINC01565O15544 149 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 CDC14BO60729 498 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ERVFC1-1P60608 527 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 VAMP3Q15836 100 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 MOGAT2Q3SYC2 334 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ZNF770Q6IQ21 691 aaPredicted RBP11.69□□□□□ -0.54
LCA5-202ENST00000392959 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
LCA5-202ENST00000392959 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 TMPRSS13Q9BYE2 586 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 SLC31A2O15432 143 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 HPP00738 406 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 HPXP02790 462 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 OR3A4PP47883 348 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
LCA5-202ENST00000392959 SMAD4Q13485 552 aaKnown RBP11.69□□□□□ -0.54
LCA5-202ENST00000392959 TRILQ7L0X0 811 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 MOB1BQ7L9L4 216 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 SSX7Q7RTT5 188 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 C9orf62Q8N4C0 152 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 KIAA1456Q9P272 454 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 RREB1Q92766 1687 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 AHCTF1Q8WYP5 2266 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 TRAV20A0A0B4J274 112 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 PLPP3O14495 311 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 ZNF32P17041 273 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 TPPP2P59282 170 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 IL13RA2Q14627 380 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 OR1L3Q8NH93 324 aa11.69□□□□□ -0.54
LCA5-202ENST00000392959 XKRY2A2RUG3 117 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 MPZL1O95297 269 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ZNF250P15622 560 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 RANP62826 216 aaKnown RBP11.68□□□□□ -0.54
LCA5-202ENST00000392959 CCL7P80098 99 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 B3GNTL1Q67FW5 361 aaPredicted RBP11.68□□□□□ -0.54
LCA5-202ENST00000392959 SLC24A4Q8NFF2 622 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 GPBAR1Q8TDU6 330 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ZNF426Q9BUY5 554 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 OPN4Q9UHM6 478 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ECM29Q5VYK3 1845 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 TRPM6Q9BX84 2022 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 M0R1B8 84 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 M0R1X1 148 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 FBP1P09467 338 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 TMEM33P57088 247 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ZNF79Q15937 498 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 VASH2Q86V25 355 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 OR11G2Q8NGC1 345 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 NDFIP1Q9BT67 221 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 NGFP01138 241 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 INPP5JQ15735 1006 aaPredicted RBP11.68□□□□□ -0.54
LCA5-202ENST00000392959 TMEM241Q24JQ0 296 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 C9orf152Q5JTZ5 239 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 LINC00052Q96N35 136 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 OCIAD1Q9NX40 245 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 NTMQ9P121 344 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
LCA5-202ENST00000392959 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 LEUTXA8MZ59 168 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 INHBBP09529 407 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 SLC38A11Q08AI6 406 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 ZNRF4Q8WWF5 429 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 POM121L2Q96KW2 1035 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 FAM60AQ9NP50 221 aa11.68□□□□□ -0.54
LCA5-202ENST00000392959 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms