RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 F8VP50 259 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 POLR3GO15318 223 aaPredicted RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 RBBP9O75884 186 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 CD8AP01732 235 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 SNRPAP09012 282 aaKnown RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 NELFEP18615 380 aaKnown RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 RPA3P35244 121 aaPredicted RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 MPV17P39210 176 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 RAB38P57729 211 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 TAS2R43P59537 309 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 PITPNAQ00169 270 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 IL5RAQ01344 420 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 C2orf80Q0P641 193 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 BTN1A1Q13410 526 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 EIF4EBP2Q13542 120 aaPredicted RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 ANGPT1Q15389 498 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 CLEC12AQ5QGZ9 265 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 ZNF880Q6PDB4 577 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 MORN3Q6PF18 240 aaPredicted RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 MRPL52Q86TS9 123 aaKnown RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 LRRC6Q86X45 466 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 CYP4Z2PQ8N1L4 340 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 C17orf78Q8N4C9 275 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 SLC35G3Q8N808 338 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 OR8A1Q8NGG7 326 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 NELFBQ8WX92 580 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 IFT81Q8WYA0 676 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 SMIM8Q96KF7 97 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 C20orf144Q9BQM9 153 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 MRPL20Q9BYC9 149 aaKnown RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 PLEKHF2Q9H8W4 249 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 TMBIM4Q9HC24 238 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 SIRT7Q9NRC8 400 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 TMEM100Q9NV29 134 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 RBM22Q9NW64 420 aaKnown RBP eCLIP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 CFAP45Q9UL16 551 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 GMEB1Q9Y692 573 aa1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 TDRD6O60522 2096 aaKnown RBP1.77□□□□□ -2.13
TRAJ40-201ENST00000390497 IGLV2-18A0A075B6J9 118 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 GOLGA8QA0A0J9YX86 632 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 KIR2DS1A0A191URI9 304 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 A0A1B0GTI1 187 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 TMEM72A0PK05 275 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 GOLGA8IPA6NC78 632 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 LRCOL1A6NCL2 159 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 OR2AT4A6NND4 320 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 C9JQL5 133 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 RNASEK-C17orf49H0YIS7 233 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 K7EN84 100 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 PLPP3O14495 311 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 UBDO15205 165 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 LDOC1O95751 146 aaPredicted RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZNF806P0C7X5 589 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 CD9P21926 228 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 PAX6P26367 422 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 LCN1P31025 176 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 XKP51811 444 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 SLC18A1P54219 525 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 LINC00315P59091 139 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 GRB2P62993 217 aaKnown RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZNF616Q08AN1 781 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 FUT5Q11128 374 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 DMC1Q14565 340 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 GUSBP1Q15486 140 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 PRSS8Q16651 343 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 PRSS54Q6PEW0 395 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 FAM231DQ6ZW35 169 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 COPS6Q7L5N1 327 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 CYP4Z1Q86W10 505 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 BBS7Q8IWZ6 715 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZCCHC24Q8N2G6 241 aaKnown RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ATPAF2Q8N5M1 289 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZNF645Q8N7E2 425 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 SPANXA2-OT1Q8N9U9 137 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 SLC26A10Q8NG04 563 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 OR2M7Q8NG81 312 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 OR4D6Q8NGJ1 314 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 OR2Y1Q8NGV0 311 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ESR2Q92731 530 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ADTRPQ96IZ2 230 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZFP3Q96NJ6 502 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 GPR82Q96P67 336 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 CDX2Q99626 313 aaPredicted RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZNF717Q9BY31 904 aaPredicted RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 NXF2Q9GZY0 626 aaKnown RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 CHMP4BQ9H444 224 aaKnown RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 ZSCAN16Q9H4T2 348 aaPredicted RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 TREM1Q9NP99 234 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 FBXO6Q9NRD1 293 aaPredicted RBP1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 SDHAF3Q9NRP4 125 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 DNAJC27Q9NZQ0 273 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 HMGXB4Q9UGU5 601 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 PRO0461Q9UI25 63 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 RAB22AQ9UL26 194 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 USH1CQ9Y6N9 552 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 SCN2AQ99250 2005 aa1.76□□□□□ -2.13
TRAJ40-201ENST00000390497 NOS1P29475 1434 aa1.75□□□□□ -2.13
TRAJ40-201ENST00000390497 MAP3K19Q56UN5 1328 aa1.75□□□□□ -2.13
TRAJ40-201ENST00000390497 IGKV6-21A0A0C4DH24 114 aa1.75□□□□□ -2.13
TRAJ40-201ENST00000390497 GMNCA6NCL1 334 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms