RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 DDOQ99489 341 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 FBXO7Q9Y3I1 522 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 THY1P04216 161 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 LINC00303Q3SY05 128 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 ALKAL2Q6UX46 152 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 ST8SIA4Q92187 359 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 SULT4A1Q9BR01 284 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 MSL2Q9HCI7 577 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 PRSS50Q9UI38 385 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 NPIPB9F8W1W9 429 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 CDIPTO14735 213 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 CTAG2O75638 210 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 NGFP01138 241 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 IFNA1P01562 189 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 HIST1H1DP16402 221 aaKnown RBP11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 Q8IYB0 196 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 GCM1Q9NP62 436 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
PTPRN2-202ENST00000389416 APOA2P02652 100 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 SLC36A1Q7Z2H8 476 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 SLC25A40Q8TBP6 338 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PCNPQ8WW12 178 aaKnown RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 FAM131CQ96AQ9 280 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 ABHD1Q96SE0 405 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 GPX7Q96SL4 187 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 AMDHD2Q9Y303 409 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 OR5B21A6NL26 309 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 ZNF354AO60765 605 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TMEM127O75204 238 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TXNDC12O95881 172 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 SNRPNP63162 240 aaKnown RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PSG4Q00888 419 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PLA2G7Q13093 441 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 KRTCAP3Q53RY4 240 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 C19orf48Q6RUI8 117 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TMEM91Q6ZNR0 172 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 GALMQ96C23 342 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 S1PR3Q99500 378 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 ZNF436Q9C0F3 470 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 DOCK9Q9BZ29 2069 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 AHRRA9YTQ3 701 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PGA4P0DJD7 388 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PGA3P0DJD8 388 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 GABRB1P18505 474 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PIGPP57054 158 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 CD276Q5ZPR3 534 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 SKA3Q8IX90 412 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 RNF32Q9H0A6 362 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 MRPS18AQ9NVS2 196 aaKnown RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TUBAL3A6NHL2 446 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 NDUFB3O43676 98 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 RAMP1O60894 148 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 GNB2P62879 340 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 C1orf185Q5T7R7 199 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 SRXN1Q9BYN0 137 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 OR2J1Q9GZK6 312 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
PTPRN2-202ENST00000389416 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 TMEM200CA6NKL6 621 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 PPIHO43447 177 aaKnown RBP11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 CNIH1O95406 144 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 TBPP20226 339 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 PNLIPRP3Q17RR3 467 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 HFEQ30201 348 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 C9orf152Q5JTZ5 239 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 TMEM268Q5VZI3 342 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 OR2W3Q7Z3T1 314 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 HSD17B11Q8NBQ5 300 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 PBDC1Q9BVG4 233 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 A0A1W2PPV4 95 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 NKX6-1P78426 367 aaPredicted RBP11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 OPCMLQ14982 345 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 ESPL1Q14674 2120 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 ATXN7O15265 892 aaPredicted RBP11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 PDCD6O75340 191 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 MT-CO2P00403 227 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 TTRP02766 147 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 OR4E1P0C645 316 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
PTPRN2-202ENST00000389416 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms