RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 MIDNQ504T8 468 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 WDR74Q6RFH5 385 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SLC22A18ASQ8N1D0 253 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 NANPQ8TBE9 248 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 MITD1Q8WV92 249 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF426Q9BUY5 554 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 WDR81Q562E7 1941 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SPTBP11277 2137 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF32P17041 273 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 CXCL2P19875 107 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 SNCAP37840 140 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 RFC3P40938 356 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 KISS1RQ969F8 398 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 RASL10BQ96S79 203 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 C12orf57Q99622 126 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 PECRQ9BY49 303 aa14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 LIN7CQ9NUP9 197 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-201ENST00000389413 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 CHD5Q8TDI0 1954 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 BRWD1Q9NSI6 2320 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 TERTO14746 1132 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 DVL1P1P54792 670 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 EDDM3AQ14507 147 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 VHLLQ6RSH7 139 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 STPG2Q8N412 459 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 RXFP4Q8TDU9 374 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 MRPS18BQ9Y676 258 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 CYB5BO43169 146 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 OR6S1Q8NH40 331 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 IP6K3Q96PC2 410 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 DEFB127Q9H1M4 99 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 NAA60Q9H7X0 242 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 WNT16Q9UBV4 365 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 LINC01387J3KSC0 135 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 TRA2AQ13595 282 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 PDCD1Q15116 288 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 SAT2Q96F10 170 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 GPR160Q9UJ42 338 aa14.29□□□□□ -0.12
PTPRN2-201ENST00000389413 BTBD17A6NE02 478 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 CST7O76096 145 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 EPHA8P29322 1005 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 GPM6AP51674 278 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 EDDM3BP56851 147 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ADPRHL1Q8NDY3 354 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 NTNG2Q96CW9 530 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 FAM234AQ9H0X4 552 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 KCNIP2Q9NS61 270 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 TMEM218A2RU14 115 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ARGFXA6NJG6 315 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 PDCD6O75340 191 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 PPIAP62937 165 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 MGAT2Q10469 447 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 UBALD2Q8IYN6 164 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF610Q8N9Z0 462 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ADAM19Q9H013 955 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 OPA3Q9H6K4 179 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 FBXL17Q9UF56 701 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 FAM96BQ9Y3D0 163 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ALPK2Q86TB3 2170 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 CTSDP07339 412 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 AKR1C3P42330 323 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 RPL7L1Q6DKI1 246 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ABHD5Q8WTS1 349 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 LHX4Q969G2 390 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 ADAT3Q96EY9 351 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 AMELYQ99218 206 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 SAMD10Q9BYL1 202 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 TIMM8BQ9Y5J9 83 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 SPAG17Q6Q759 2223 aa14.28□□□□□ -0.12
PTPRN2-201ENST00000389413 MDFIC2A0A1B0GVS7 189 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 H3BMH7 237 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 IAPPP10997 89 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 FSTP19883 344 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 ROM1Q03395 351 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 MICBQ29980 383 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 IGHV3-64DA0A0J9YX35 117 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 AQP7P3A6NL99 342 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 ZNF727A8MUV8 499 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 TMEM229AB2RXF0 380 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 FAM209AQ5JX71 171 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 SKA3Q8IX90 412 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 OR11H4Q8NGC9 324 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 OR11L1Q8NGX0 322 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 ZFP64Q9NPA5 681 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 PSENENQ9NZ42 101 aa14.27□□□□□ -0.12
PTPRN2-201ENST00000389413 LIMK1P53667 647 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 ZNF345Q14585 488 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 ZNF787Q6DD87 383 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 AICDAQ9GZX7 198 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 UNC13CQ8NB66 2214 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 OR2M5A3KFT3 312 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 H7BYZ3 331 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 PGA3P0DJD8 388 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 CASP6P55212 293 aa14.27□□□□□ -0.13
PTPRN2-201ENST00000389413 ZNF362Q5T0B9 420 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms