RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CRYGDP07320 174 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CTSDP07339 412 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CD14P08571 375 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPSAP08865 295 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MMP7P09237 267 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CPA3P15088 417 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PPIBP23284 216 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 IL3RAP26951 378 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CRYBB3P26998 211 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PSMB6P28072 239 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 HTR2CP28335 458 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 KIF5BP33176 963 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACTN2P35609 894 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR1P46091 355 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR3A3P47888 321 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 P2RY1P47900 373 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF138P52744 262 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 KIAA1024LP59773 190 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PLP1P60201 277 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPL26P61254 145 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPL7AP62424 266 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPS21P63220 83 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDK16Q00536 496 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PLOD1Q02809 727 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF117Q03924 483 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDH17Q12864 832 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 SELENBP1Q13228 472 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CAMK4Q16566 473 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PIGYQ3MUY2 71 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACSBG2Q5FVE4 666 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM31Q5JXX7 168 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 C9orf135Q5VTT2 229 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 EPGNQ6UW88 154 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TAF8Q7Z7C8 310 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RALGPS2Q86X27 583 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CEP57Q86XR8 500 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TGIF2LXQ8IUE1 241 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CREBRFQ8IUR6 639 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC50Q8IVM0 306 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 LINC00346Q8IVM7 164 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBE2DNLQ8IWF7 75 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACOT4Q8N9L9 421 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 SPERTQ8NA61 448 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR11G2Q8NGC1 345 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR5A1Q8NGJ0 315 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 NANPQ8TBE9 248 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RXFP4Q8TDU9 374 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 SEPT8Q92599 483 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 DNASE1L2Q92874 299 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 PSMG2Q969U7 264 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 BPIFA2Q96DR5 249 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 SGCZQ96LD1 299 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM56Q96MV1 263 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF714Q96N38 554 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 QKIQ96PU8 341 aaKnown RBP eCLIP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CAMK2N2Q96S95 79 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR22Q99680 433 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 AGPAT1Q99943 283 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 DESI2Q9BSY9 194 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 NDUFAF3Q9BU61 184 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 ALG12Q9BV10 488 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 EMC6Q9BV81 110 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 HIGD2AQ9BW72 106 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 SHCBP1LQ9BZQ2 653 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 BCL2L14Q9BZR8 327 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TSPYL1Q9H0U9 437 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MTIF3Q9H2K0 278 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MS4A6AQ9H2W1 248 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 NAA60Q9H7X0 242 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 HRASLSQ9HDD0 168 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPS30Q9NP92 439 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 EQTNQ9NQ60 294 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBAP1Q9NZ09 502 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RSL24D1Q9UHA3 163 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 DIMT1Q9UNQ2 313 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPL26L1Q9UNX3 145 aaKnown RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 A0A1B0GUL6 1792 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRPM3Q9HCF6 1732 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYOM1P52179 1685 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 CUL7Q14999 1698 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 USP32Q8NFA0 1604 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 MADDQ8WXG6 1647 aa-1.8□□□□□ -2.7
RNU6-540P-201ENST00000384622 GLI2P10070 1586 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 DUOX2Q9NRD8 1548 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 AKNAQ7Z591 1439 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ADGRL3Q9HAR2 1447 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYH11P35749 1972 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ADCY9O60503 1353 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRAV2A0A0B4J234 112 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CD300LBA8K4G0 201 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF705EA8MWA4 302 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 FAM86B1E9PN63 330 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 PLPP3O14495 311 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 NDC80O14777 642 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 NPHP1O15259 732 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 NME6O75414 186 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MTX2O75431 263 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2B3O76000 313 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 GH1P01241 217 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPN1P04843 607 aaKnown RBP-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms