RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR4Q2P0C623 313 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 LIPCP11150 499 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 MPIP34949 423 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 MPV17P39210 176 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 RPL10AP62906 217 aaKnown RBP3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 SHHQ15465 462 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 DNLZQ5SXM8 178 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 LIN9Q5TKA1 542 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 RESP18Q5W5W9 173 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 MED27Q6P2C8 311 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 CLEC19AQ6UXS0 136 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 PDPNQ86YL7 162 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 NELFCDQ8IXH7 590 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF561Q8N587 486 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR8K3Q8NH51 312 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 LGALS14Q8TCE9 139 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 RMI2Q96E14 147 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 IP6K3Q96PC2 410 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 CIB1Q99828 191 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 FRMD8P1Q9BZ68 369 aaPredicted RBP3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 CHRNA10Q9GZZ6 450 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 RAB1BQ9H0U4 201 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 RBMX2Q9Y388 322 aaKnown RBP3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 AK9Q5TCS8 1911 aa3.12□□□□□ -1.91
RNU6-40P-201ENST00000384254 KIF26AQ9ULI4 1882 aaPredicted RBP3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 LOC102724200A0A096LPH7 203 aaPredicted RBP3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 IGKV6-21A0A0C4DH24 114 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 TMEM72A0PK05 275 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 CEACAM18A8MTB9 384 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF879B4DU55 563 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 PRAMEF26H0Y7S4 382 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR7C2O60412 319 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 SC5DO75845 299 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 NELFEP18615 380 aaKnown RBP3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 VSNL1P62760 191 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 FAHD1Q6P587 224 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 CASP12Q6UXS9 341 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 SSX6Q7RTT6 188 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 SETD3Q86TU7 594 aaPredicted RBP3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 BBS7Q8IWZ6 715 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZCCHC24Q8N2G6 241 aaKnown RBP3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 CCNYL1Q8N7R7 359 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 SPERTQ8NA61 448 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 YIPF6Q96EC8 236 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 ADTRPQ96IZ2 230 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 METTL26Q96S19 204 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 VAT1Q99536 393 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 CTRCQ99895 268 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF229Q9UJW7 825 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 ACOT9Q9Y305 439 aa3.11□□□□□ -1.91
RNU6-40P-201ENST00000384254 MGAT4DA6NG13 374 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 K7EN84 100 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 SNRPAP09012 282 aaKnown RBP3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 SLC18A1P54219 525 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 STX4Q12846 297 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 MAD2L1BPQ15013 274 aaPredicted RBP3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 FBXL19-AS1Q494R0 122 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 SLC35G3Q8N808 338 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR51Q1Q8NH59 317 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 WDR34Q96EX3 536 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 RILPQ96NA2 401 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 PRRG3Q9BZD7 231 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 PRORYQ9H606 182 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 ACOT13Q9NPJ3 140 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF302Q9NR11 478 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 NLE1Q9NVX2 485 aaPredicted RBP3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 CHMP5Q9NZZ3 219 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 ANXA10Q9UJ72 324 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
RNU6-40P-201ENST00000384254 SLC5A10A0PJK1 596 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF98A6NK75 572 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 LGALS9O00182 355 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 GIMD1P0DJR0 217 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 CD28P10747 220 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ZNF14P17017 642 aaPredicted RBP3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 NTF3P20783 257 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 HTR2BP41595 481 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ATP5G2Q06055 141 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ATP6AP1LQ52LC2 224 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 TRMT10CQ7L0Y3 403 aaKnown RBP3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 STK40Q8N2I9 435 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ATPAF2Q8N5M1 289 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 MIR7-3HGQ8N6C7 128 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR2M7Q8NG81 312 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR4D6Q8NGJ1 314 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 OR52N1Q8NH53 320 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 SMIM8Q96KF7 97 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 SCRT1Q9BWW7 348 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 ING2Q9H160 280 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 GOLPH3Q9H4A6 298 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 SDHAF3Q9NRP4 125 aa3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 RBM22Q9NW64 420 aaKnown RBP eCLIP3.09□□□□□ -1.91
RNU6-40P-201ENST00000384254 IL37Q9NZH6 218 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms