RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 THAP7Q9BT49 309 aaPredicted RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 MRPL37Q9BZE1 423 aaKnown RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 ZMAT3Q9HA38 289 aaKnown RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 RABL2AQ9UBK7 228 aaPredicted RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 RABL2BQ9UNT1 228 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 A0A0A6YYD4 124 aa22.85■■□□□ 1.25
MSX1-201ENST00000382723 A0A1B0GVG6 124 aa22.85■■□□□ 1.25
MSX1-201ENST00000382723 RPS27AP62979 156 aaKnown RBP22.85■■□□□ 1.25
MSX1-201ENST00000382723 CHST4Q8NCG5 386 aa22.85■■□□□ 1.25
MSX1-201ENST00000382723 GTF3AQ92664 365 aaKnown RBP22.85■■□□□ 1.25
MSX1-201ENST00000382723 URM1Q9BTM9 101 aaKnown RBP22.85■■□□□ 1.25
MSX1-201ENST00000382723 OCEL1Q9H607 264 aa22.85■■□□□ 1.25
MSX1-201ENST00000382723 AUNIPQ9H7T9 357 aa22.85■■□□□ 1.25
MSX1-201ENST00000382723 CADP27708 2225 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.84■■□□□ 1.25
MSX1-201ENST00000382723 RAB27BO00194 218 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 LANCL1O43813 399 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 C1QL1O75973 258 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 SFTPBP07988 381 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 CD3GP09693 182 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 GPR176Q14439 515 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 ZSCAN4Q8NAM6 433 aaPredicted RBP22.84■■□□□ 1.25
MSX1-201ENST00000382723 OR13G1Q8NGZ3 307 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 SLC22A4Q9H015 551 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 OR51I2Q9H344 312 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 NPDC1Q9NQX5 325 aaPredicted RBP22.84■■□□□ 1.25
MSX1-201ENST00000382723 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.84■■□□□ 1.25
MSX1-201ENST00000382723 F5H5P2 479 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 SYNGR1O43759 233 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 MNDAP41218 407 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 NPBWR2P48146 333 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 SELENOVP59797 346 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 CDH24Q86UP0 819 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 ZNF808Q8N4W9 903 aaPredicted RBP22.84■■□□□ 1.25
MSX1-201ENST00000382723 NKIRAS2Q9NYR9 191 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 TAAR3PQ9P1P4 343 aa22.84■■□□□ 1.25
MSX1-201ENST00000382723 IGLV3-9A0A075B6K5 115 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 A0A0A6YYH2 397 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 A6NJ64 397 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 CTDSPLO15194 276 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 ZNF780AO75290 641 aaPredicted RBP22.83■■□□□ 1.25
MSX1-201ENST00000382723 CYB5AP00167 134 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 GRPP07492 148 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 GTF2F2P13984 249 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 AGAP20933 346 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 SCN1BQ07699 218 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 RGS21Q2M5E4 152 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 RAB12Q6IQ22 244 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 OR10R2Q8NGX6 335 aa22.83■■□□□ 1.25
MSX1-201ENST00000382723 MRPL24Q96A35 216 aaKnown RBP22.83■■□□□ 1.25
MSX1-201ENST00000382723 SOCS1O15524 211 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 BCL3P20749 454 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 INPP1P49441 399 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 MKXQ8IYA7 352 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 POC5Q8NA72 575 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 C19orf18Q8NEA5 215 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 OR2Z1Q8NG97 314 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 OR52I2Q8NH67 350 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 C15orf40Q8WUR7 153 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 SMIM4Q8WVI0 70 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 CXXC4Q9H2H0 198 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 IL36GQ9NZH8 169 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 HIVEP3Q5T1R4 2406 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 PLSCR5A0PG75 271 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 MEIOCA2RUB1 952 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 ISPDA4D126 451 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 LRP5LA4QPB2 252 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 WIPF3A6NGB9 483 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 CD3EP07766 207 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 RTN4RL2Q86UN3 420 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 DMRTC2Q8IXT2 367 aaPredicted RBP22.82■■□□□ 1.24
MSX1-201ENST00000382723 YIPF5Q969M3 257 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 MTCH1Q9NZJ7 389 aa22.82■■□□□ 1.24
MSX1-201ENST00000382723 SHISA9B4DS77 424 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 SCGNO76038 276 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 CHRM2P08172 466 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 SAXO1Q8IYX7 474 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 OSR2Q8N2R0 312 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 OR56B1Q8NGI3 324 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 FCAMRQ8WWV6 532 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 TRIM63Q969Q1 353 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 ELF5Q9UKW6 265 aaPredicted RBP22.81■■□□□ 1.24
MSX1-201ENST00000382723 TBC1D24Q9ULP9 559 aa22.81■■□□□ 1.24
MSX1-201ENST00000382723 ZSCAN5BA6NJL1 495 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 GSTZ1O43708 216 aaPredicted RBP22.8■■□□□ 1.24
MSX1-201ENST00000382723 RHBDL1O75783 438 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 OR4A8P0C604 315 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 GABRR1P24046 479 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 ZNF154Q13106 437 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 ADIPOQQ15848 244 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 FAM189A2Q15884 450 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 FAM76BQ5HYJ3 339 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 ZNF57Q68EA5 555 aaPredicted RBP22.8■■□□□ 1.24
MSX1-201ENST00000382723 FBXL14Q8N1E6 418 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 SCCPDHQ8NBX0 429 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 NEUROG1Q92886 237 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 ZNF488Q96MN9 340 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 ZNF442Q9H7R0 627 aa22.8■■□□□ 1.24
MSX1-201ENST00000382723 RBFOX1Q9NWB1 397 aaKnown RBP22.8■■□□□ 1.24
MSX1-201ENST00000382723 F8VVB4 439 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms