RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 RTBDNQ9BSG5 229 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 PATZ1Q9HBE1 687 aaKnown RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 TCFL5Q9UL49 500 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 OR51B4Q9Y5P0 310 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 LAMA1P25391 3075 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 SCN3AQ9NY46 2000 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 A0A1B0GU03 582 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 OR6A2O95222 327 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 H2BFMP0C1H6 154 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CD46P15529 392 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ATP6V0CP27449 155 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CTXN1P60606 82 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 UBE2V1Q13404 147 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ARHGAP11BQ3KRB8 267 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CYYR1Q96J86 154 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF514Q96K75 400 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF840PA6NDX5 716 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 AQP7P3A6NL99 342 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 F6UZH7 168 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CD70P32970 193 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 SUCLG1P53597 346 aaKnown RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 EMP2P54851 167 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CSNK2A1P68400 391 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 LMAN2Q12907 356 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 DCST2Q5T1A1 773 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CDCP2Q5VXM1 449 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ASPHD2Q6ICH7 369 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 DPY19L2P2Q6ZN68 376 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 TMEM256Q8N2U0 113 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CSNK2A3Q8NEV1 391 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 OR10S1Q8NGN2 331 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 CLUHP3Q96NS8 147 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 RNF2Q99496 336 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 DOCK9Q9BZ29 2069 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 PLAURQ03405 335 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 ITPRIPL2Q3MIP1 535 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 SPSB3Q6PJ21 355 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 MCEMP1Q8IX19 187 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.28
VLDLR-202ENST00000382099 ZCCHC14Q8WYQ9 949 aaKnown RBP13.27□□□□□ -0.28
VLDLR-202ENST00000382099 SPACA5Q96QH8 159 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 B9D1Q9UPM9 204 aa13.27□□□□□ -0.28
VLDLR-202ENST00000382099 A0A1W2PNV4 684 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 DDAH2O95865 285 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.29
VLDLR-202ENST00000382099 FPR2P25090 351 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 C16orf82Q7Z2V1 217 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 NICN1Q9BSH3 213 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 ANGPTL4Q9BY76 406 aa13.27□□□□□ -0.29
VLDLR-202ENST00000382099 SEPSECSQ9HD40 501 aaKnown RBP13.27□□□□□ -0.29
VLDLR-202ENST00000382099 A0A1W2PN81 502 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 H7C4K7 107 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 HCRTR2O43614 444 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 TNFSF13O75888 250 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 MPIG6BO95866 241 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 CHRNA7P36544 502 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 HINT1P49773 126 aaPredicted RBP13.26□□□□□ -0.29
VLDLR-202ENST00000382099 RND2P52198 227 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 IL15RAQ13261 267 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 CHRFAM7AQ494W8 412 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 C1QL3Q5VWW1 255 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 FAM166AQ6J272 317 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 Q7L0L9 218 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 SYT13Q7L8C5 426 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 ASB5Q8WWX0 329 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 SCARF2Q96GP6 870 aaPredicted RBP13.26□□□□□ -0.29
VLDLR-202ENST00000382099 NSG1A0A0A6YYJ2 146 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 H7BYZ3 331 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 LMX1BO60663 402 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 EOMESO95936 686 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 GALR1P47211 349 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 RABIFP47224 123 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 POLR2LP62875 67 aaKnown RBP13.26□□□□□ -0.29
VLDLR-202ENST00000382099 ARHGAP19Q14CB8 494 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 PCK2Q16822 640 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 SLC48A1Q6P1K1 146 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 ALG14Q96F25 216 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 VN1R1Q9GZP7 353 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 WWTR1Q9GZV5 400 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 B3GALT5Q9Y2C3 310 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 A0A0B4J2E0 115 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 A0A1B0GX12 115 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 NDUFB8O95169 186 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 FHL1Q13642 323 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 TRMT12Q53H54 448 aaKnown RBP13.26□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 CLDN16Q9Y5I7 305 aa13.26□□□□□ -0.29
VLDLR-202ENST00000382099 A8MVM7 634 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
VLDLR-202ENST00000382099 RUNX1Q01196 453 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 Q6ZN92 141 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 NKAIN3Q8N8D7 197 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms