RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MASP2O00187 686 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 MPC2O95563 127 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 GFERP55789 205 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
SNPH-201ENST00000381867 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
SNPH-201ENST00000381867 TMEM272A0A1B0GTI8 110 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 CST2P09228 141 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 SLC25A1P53007 311 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 Q1RN00 199 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 KCNE4Q8WWG9 221 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 NEU3Q9UQ49 428 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 PGA3P0DJD8 388 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 CD200P41217 278 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
SNPH-201ENST00000381867 CLN3Q13286 438 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 PMS2P11Q13670 270 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 KIAA1456Q9P272 454 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 ONECUT2O95948 504 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 CD96P40200 585 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 PCBP3P57721 371 aaKnown RBP12.51□□□□□ -0.41
SNPH-201ENST00000381867 TMPRSS11FQ6ZWK6 438 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
SNPH-201ENST00000381867 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 KLK10O43240 276 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 GP1BAP07359 652 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 PTHLHP12272 177 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 FAHP16930 419 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 ZBTB25P24278 435 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 METAP1P53582 386 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 IGSF11Q5DX21 431 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 ZNF426Q9BUY5 554 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 OR5H15A6NDH6 313 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 OR5H1A6NKK0 313 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 UQCC1Q9NVA1 299 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 OR5V1Q9UGF6 321 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 COLQQ9Y215 455 aaPredicted RBP12.5□□□□□ -0.41
SNPH-201ENST00000381867 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 IGHV1OR21-1A0A087WYE8 117 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 TCAPO15273 167 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 DHHO43323 396 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 SPRY1O43609 319 aaPredicted RBP12.5□□□□□ -0.41
SNPH-201ENST00000381867 CYC1P08574 325 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 CLDN15P56746 228 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 CD300CQ08708 224 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 ZNF816Q0VGE8 651 aaPredicted RBP12.5□□□□□ -0.41
SNPH-201ENST00000381867 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 RAB32Q13637 225 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 RNASEKQ6P5S7 137 aaKnown RBP12.5□□□□□ -0.41
SNPH-201ENST00000381867 Q7L0L9 218 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 TRAF4Q9BUZ4 470 aaPredicted RBP12.5□□□□□ -0.41
SNPH-201ENST00000381867 SIGLEC7Q9Y286 467 aa12.5□□□□□ -0.41
SNPH-201ENST00000381867 A0A087WUJ7 227 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 GPANK1O95872 356 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 EXTL1Q92935 676 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 TNFSF14O43557 240 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 CTAG2O75638 210 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 HIST1H1DP16402 221 aaKnown RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 FUT3P21217 361 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 ZNF154Q13106 437 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 CEBPEQ15744 281 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 STPG2Q8N412 459 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 PELI1Q96FA3 418 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 ZNF764Q96H86 408 aaPredicted RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 RAB40CQ96S21 281 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 SIRT3Q9NTG7 399 aaPredicted RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 M0R143 59 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 MT-CO3P00414 261 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 SP6Q3SY56 376 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 WDR38Q5JTN6 314 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 BVESQ8NE79 360 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 GALMQ96C23 342 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 M0R1B8 84 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 MYF5P13349 255 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 GPM6AP51674 278 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 SLC37A1P57057 533 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 FAM3AP98173 230 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 INSM1Q01101 510 aaPredicted RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 DUSP2Q05923 314 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
SNPH-201ENST00000381867 MYPOPQ86VE0 399 aaPredicted RBP12.49□□□□□ -0.41
SNPH-201ENST00000381867 MSRB3Q8IXL7 192 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms