RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TAF15Q92804 592 aaKnown RBP eCLIP10.65□□□□□ -0.71
RPAIN-202ENST00000381208 DUS3LQ96G46 650 aaKnown RBP10.65□□□□□ -0.71
RPAIN-202ENST00000381208 MMP27Q9H306 513 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 ZNF222Q9UK12 451 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 PIGLQ9Y2B2 252 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 IGKV1D-17A0A075B6S4 117 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 CCDC182A6NF36 153 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 ZNF670-ZNF695F2Z2N8 137 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 LOC110117498-PIK3R3F6TDL0 507 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 H0YAE9 185 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 SLC1A7O00341 560 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 DLGAP1O14490 977 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 NOS1APO75052 506 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-202ENST00000381208 RHBDL1O75783 438 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 SELLP14151 372 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 SAA4P35542 130 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 PROK1P58294 105 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 AANATQ16613 207 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 C11orf88Q6PI97 169 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 HAGHLQ6PII5 290 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-202ENST00000381208 GID4Q8IVV7 300 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 POC1AQ8NBT0 407 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 UTP4Q969X6 686 aaKnown RBP10.64□□□□□ -0.71
RPAIN-202ENST00000381208 FGF23Q9GZV9 251 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-202ENST00000381208 RAB18Q9NP72 206 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 KRT84Q9NSB2 600 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 CLN6Q9NWW5 311 aa10.64□□□□□ -0.71
RPAIN-202ENST00000381208 J3QT63 122 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 PSMD9O00233 223 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 PRKYO43930 277 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 CIB2O75838 187 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 MRPL3P09001 348 aaKnown RBP10.63□□□□□ -0.71
RPAIN-202ENST00000381208 FAHP16930 419 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 DAPP51397 102 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 CAPZA1P52907 286 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 HCCSP53701 268 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 TAF9Q16594 264 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 BCL2L15Q5TBC7 163 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 C1orf146Q5VVC0 180 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 SLX4IPQ5VYV7 408 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 ACP7Q6ZNF0 438 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 Q6ZSV7 163 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 ZDHHC13Q8IUH4 622 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 SLC35F2Q8IXU6 374 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 UBE2FQ969M7 185 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 HEXA-AS1Q9H8Q6 139 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 TCF7L1Q9HCS4 588 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 MAB21L2Q9Y586 359 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 SNX5Q9Y5X3 404 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 R4GMQ9 66 aa10.63□□□□□ -0.71
RPAIN-202ENST00000381208 ANKRD61A6NGH8 418 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 RFPL4AA6NLU0 287 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 ZAR1LA6NP61 321 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 RFPL4AL1F8VTS6 287 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 G3V2T6 193 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 TTRP02766 147 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 PGA5P0DJD9 388 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 FCGR1AP12314 374 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 FASP25445 335 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 HAAOP46952 286 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 CXCR4P61073 352 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 DEFA6Q01524 100 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 ATP6AP1Q15904 470 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 AADACL4Q5VUY2 407 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 CALHM1Q8IU99 346 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 TCEANCQ8N8B7 351 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 ZNRF1Q8ND25 227 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 OR51G2Q8NGK0 314 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 MEGF9Q9H1U4 602 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 OR52A1Q9UKL2 312 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 COPS3Q9UNS2 423 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 V9GYS6 101 aa10.62□□□□□ -0.71
RPAIN-202ENST00000381208 KCNAB3O43448 404 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 NXPH2O95156 264 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 KRT8P05787 483 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 MPZP25189 248 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 PRDX2P32119 198 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 RPL31P62899 125 aaKnown RBP10.61□□□□□ -0.71
RPAIN-202ENST00000381208 EFNB1P98172 346 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 KLRD1Q13241 179 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 C2orf68Q2NKX9 166 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 PDLIM3Q53GG5 364 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-202ENST00000381208 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 Q6ZSR3 168 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 RBM4BQ9BQ04 359 aaKnown RBP10.61□□□□□ -0.71
RPAIN-202ENST00000381208 ADGRL4Q9HBW9 690 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 USE1Q9NZ43 259 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 FBLN5Q9UBX5 448 aa10.61□□□□□ -0.71
RPAIN-202ENST00000381208 WARS2Q9UGM6 360 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms